gene detail

Gene description

TAIR ID: AT5G44650

No short description

Pathogen responsiveness: -0.43

General responsiveness: 1.70

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TAAFFX.21361.1.S1_AT

GO biological process

photosystem I assembly, hyperosmotic salinity response, response to water deprivation, chloroplast organization, response to photooxidative stress, heat acclimation

GO cellular component

chloroplast thylakoid membrane, chloroplast, thylakoid, integral component of membrane

GO molecular function

protein binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT4G24540, AT2G45660, AT2G22540

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.59	2.37E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.41	8.46E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.39	4.97E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.60	1.78E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.72	5.29E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.70	3.16E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.73	7.25E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-3.26	1.64E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.07	3.12E-16
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.71	3.89E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.52	3.14E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.62	1.96E-11
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.64	3.44E-11
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.58	1.65E-10
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.93	1.33E-06