Gene: AT3G13672
     

Gene description


TAIR ID: AT3G13672

Short description: TRAF-like superfamily protein

Pathogen responsiveness: -0.32

General responsiveness: 1.13

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


ubiquitin-dependent protein catabolic process, multicellular organism development


GO cellular component


nucleus


GO molecular function


ubiquitin protein ligase activity


Protein domain


PfamPF03145, Seven in absentia protein family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G24540, AT2G45660, AT2G22540

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE13739_WT_GO  view

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.221.47E-07
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.301.18E-02
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.982.27E-02
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-4.181.82E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.312.75E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.891.47E-06
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.105.00E-04
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.684.00E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.171.16E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.111.34E-05
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d-1.562.10E-03






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