Gene: AT5G39610
     

Gene description


TAIR ID: AT5G39610

Short description: NAC domain containing protein 6

Pathogen responsiveness: 1.43

General responsiveness: 1.62

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G009892   GRMZM5G898290  

Wheat: No orthologous gene

GO biological process


leaf senescence, regulation of gene expression, response to ethylene, response to abscisic acid, positive regulation of sequence-specific DNA binding transcription factor activity, response to hydrogen peroxide, response to salt stress, response to auxin, transcription, DNA-templated, positive regulation of age-related resistance, positive regulation of leaf senescence, positive regulation of programmed cell death, response to salt, lateral root development, regulation of seed germination, stress-induced premature senescence, response to oxidative stress, multicellular organism development


GO cellular component


nucleus


GO molecular function


protein homodimerization activity, transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


46 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d1.631.14E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.873.38E-03
GSE17464Penta, controlPenta, PstDC3000 12 h-1.581.31E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.053.58E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.749.45E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.231.59E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h5.411.84E-10
GSE2169Col, WT, waterCol, WT, chitin 30 min-1.511.86E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h1.652.58E-02
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d1.558.32E-05
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d2.362.31E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h3.356.14E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h3.161.35E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.542.15E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h4.071.10E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.512.54E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.939.72E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.741.24E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.304.15E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.619.53E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.736.07E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.774.38E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.275.40E-05
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.352.41E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.192.75E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.321.64E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h4.151.49E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.291.69E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h3.371.55E-10
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.879.77E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h3.677.04E-12
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.672.68E-03
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h4.142.65E-14
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.613.88E-03
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.741.35E-03
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.819.86E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.548.60E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.563.62E-03
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h3.211.59E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.827.38E-04
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.661.98E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h1.582.19E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h3.181.82E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.831.34E-05
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min-1.508.48E-09
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.987.77E-03






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