GO Enrichment Analysis of Co-expressed Genes with
AT4G24540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 2 | GO:0018293: protein-FAD linkage | 0.00E+00 |
| 3 | GO:0034553: mitochondrial respiratory chain complex II assembly | 0.00E+00 |
| 4 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 5 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 6 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 7 | GO:0009661: chromoplast organization | 0.00E+00 |
| 8 | GO:0009902: chloroplast relocation | 1.67E-05 |
| 9 | GO:0006520: cellular amino acid metabolic process | 6.61E-05 |
| 10 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 1.44E-04 |
| 11 | GO:0006567: threonine catabolic process | 1.44E-04 |
| 12 | GO:0016487: farnesol metabolic process | 1.44E-04 |
| 13 | GO:1902265: abscisic acid homeostasis | 1.44E-04 |
| 14 | GO:0006285: base-excision repair, AP site formation | 1.44E-04 |
| 15 | GO:0006169: adenosine salvage | 1.44E-04 |
| 16 | GO:0000103: sulfate assimilation | 2.18E-04 |
| 17 | GO:0080183: response to photooxidative stress | 3.29E-04 |
| 18 | GO:0043100: pyrimidine nucleobase salvage | 3.29E-04 |
| 19 | GO:0019388: galactose catabolic process | 3.29E-04 |
| 20 | GO:0007154: cell communication | 3.29E-04 |
| 21 | GO:0019441: tryptophan catabolic process to kynurenine | 3.29E-04 |
| 22 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.29E-04 |
| 23 | GO:0016570: histone modification | 5.40E-04 |
| 24 | GO:0031022: nuclear migration along microfilament | 5.40E-04 |
| 25 | GO:0019419: sulfate reduction | 5.40E-04 |
| 26 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 5.40E-04 |
| 27 | GO:0044210: 'de novo' CTP biosynthetic process | 5.40E-04 |
| 28 | GO:0017006: protein-tetrapyrrole linkage | 5.40E-04 |
| 29 | GO:1901562: response to paraquat | 5.40E-04 |
| 30 | GO:0071492: cellular response to UV-A | 5.40E-04 |
| 31 | GO:0009585: red, far-red light phototransduction | 6.36E-04 |
| 32 | GO:0009584: detection of visible light | 7.73E-04 |
| 33 | GO:0009963: positive regulation of flavonoid biosynthetic process | 7.73E-04 |
| 34 | GO:0009647: skotomorphogenesis | 7.73E-04 |
| 35 | GO:0009590: detection of gravity | 7.73E-04 |
| 36 | GO:0055114: oxidation-reduction process | 9.92E-04 |
| 37 | GO:0006646: phosphatidylethanolamine biosynthetic process | 1.02E-03 |
| 38 | GO:0070534: protein K63-linked ubiquitination | 1.02E-03 |
| 39 | GO:0006545: glycine biosynthetic process | 1.02E-03 |
| 40 | GO:0071486: cellular response to high light intensity | 1.02E-03 |
| 41 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.02E-03 |
| 42 | GO:0009765: photosynthesis, light harvesting | 1.02E-03 |
| 43 | GO:0009649: entrainment of circadian clock | 1.02E-03 |
| 44 | GO:0006546: glycine catabolic process | 1.02E-03 |
| 45 | GO:0034613: cellular protein localization | 1.02E-03 |
| 46 | GO:0010021: amylopectin biosynthetic process | 1.02E-03 |
| 47 | GO:0019252: starch biosynthetic process | 1.16E-03 |
| 48 | GO:0008654: phospholipid biosynthetic process | 1.16E-03 |
| 49 | GO:0044209: AMP salvage | 1.29E-03 |
| 50 | GO:0016120: carotene biosynthetic process | 1.29E-03 |
| 51 | GO:0046283: anthocyanin-containing compound metabolic process | 1.29E-03 |
| 52 | GO:0010236: plastoquinone biosynthetic process | 1.29E-03 |
| 53 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.59E-03 |
| 54 | GO:0006301: postreplication repair | 1.59E-03 |
| 55 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.59E-03 |
| 56 | GO:0006555: methionine metabolic process | 1.59E-03 |
| 57 | GO:0070814: hydrogen sulfide biosynthetic process | 1.59E-03 |
| 58 | GO:0006796: phosphate-containing compound metabolic process | 1.59E-03 |
| 59 | GO:0033365: protein localization to organelle | 1.59E-03 |
| 60 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.91E-03 |
| 61 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.91E-03 |
| 62 | GO:0017148: negative regulation of translation | 1.91E-03 |
| 63 | GO:0009903: chloroplast avoidance movement | 1.91E-03 |
| 64 | GO:0050790: regulation of catalytic activity | 2.24E-03 |
| 65 | GO:0010161: red light signaling pathway | 2.24E-03 |
| 66 | GO:0006368: transcription elongation from RNA polymerase II promoter | 2.24E-03 |
| 67 | GO:0009396: folic acid-containing compound biosynthetic process | 2.24E-03 |
| 68 | GO:0022904: respiratory electron transport chain | 2.24E-03 |
| 69 | GO:0000105: histidine biosynthetic process | 2.60E-03 |
| 70 | GO:0009231: riboflavin biosynthetic process | 2.60E-03 |
| 71 | GO:0005978: glycogen biosynthetic process | 2.60E-03 |
| 72 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.60E-03 |
| 73 | GO:0030091: protein repair | 2.60E-03 |
| 74 | GO:0050821: protein stabilization | 2.60E-03 |
| 75 | GO:0009853: photorespiration | 2.92E-03 |
| 76 | GO:0015996: chlorophyll catabolic process | 2.96E-03 |
| 77 | GO:0030001: metal ion transport | 3.32E-03 |
| 78 | GO:0046916: cellular transition metal ion homeostasis | 3.35E-03 |
| 79 | GO:0035999: tetrahydrofolate interconversion | 3.76E-03 |
| 80 | GO:0009641: shade avoidance | 4.18E-03 |
| 81 | GO:0009970: cellular response to sulfate starvation | 4.18E-03 |
| 82 | GO:0048229: gametophyte development | 4.61E-03 |
| 83 | GO:0000272: polysaccharide catabolic process | 4.61E-03 |
| 84 | GO:0050826: response to freezing | 5.52E-03 |
| 85 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.52E-03 |
| 86 | GO:0006829: zinc II ion transport | 5.52E-03 |
| 87 | GO:0009785: blue light signaling pathway | 5.52E-03 |
| 88 | GO:0030048: actin filament-based movement | 5.52E-03 |
| 89 | GO:0006006: glucose metabolic process | 5.52E-03 |
| 90 | GO:0048440: carpel development | 6.00E-03 |
| 91 | GO:0006487: protein N-linked glycosylation | 7.52E-03 |
| 92 | GO:0019344: cysteine biosynthetic process | 7.52E-03 |
| 93 | GO:0051017: actin filament bundle assembly | 7.52E-03 |
| 94 | GO:0008299: isoprenoid biosynthetic process | 8.06E-03 |
| 95 | GO:0015992: proton transport | 8.61E-03 |
| 96 | GO:0019915: lipid storage | 8.61E-03 |
| 97 | GO:0009058: biosynthetic process | 9.48E-03 |
| 98 | GO:0006012: galactose metabolic process | 9.75E-03 |
| 99 | GO:0009693: ethylene biosynthetic process | 9.75E-03 |
| 100 | GO:0009411: response to UV | 9.75E-03 |
| 101 | GO:0040007: growth | 9.75E-03 |
| 102 | GO:0006284: base-excision repair | 1.03E-02 |
| 103 | GO:0042391: regulation of membrane potential | 1.16E-02 |
| 104 | GO:0080022: primary root development | 1.16E-02 |
| 105 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.41E-02 |
| 106 | GO:0016032: viral process | 1.48E-02 |
| 107 | GO:1901657: glycosyl compound metabolic process | 1.55E-02 |
| 108 | GO:0006464: cellular protein modification process | 1.62E-02 |
| 109 | GO:0016126: sterol biosynthetic process | 1.84E-02 |
| 110 | GO:0005975: carbohydrate metabolic process | 1.87E-02 |
| 111 | GO:0010029: regulation of seed germination | 1.91E-02 |
| 112 | GO:0010411: xyloglucan metabolic process | 2.06E-02 |
| 113 | GO:0048573: photoperiodism, flowering | 2.06E-02 |
| 114 | GO:0018298: protein-chromophore linkage | 2.22E-02 |
| 115 | GO:0009407: toxin catabolic process | 2.38E-02 |
| 116 | GO:0010043: response to zinc ion | 2.46E-02 |
| 117 | GO:0007568: aging | 2.46E-02 |
| 118 | GO:0010119: regulation of stomatal movement | 2.46E-02 |
| 119 | GO:0009637: response to blue light | 2.63E-02 |
| 120 | GO:0006099: tricarboxylic acid cycle | 2.71E-02 |
| 121 | GO:0045454: cell redox homeostasis | 2.87E-02 |
| 122 | GO:0009640: photomorphogenesis | 3.15E-02 |
| 123 | GO:0009636: response to toxic substance | 3.42E-02 |
| 124 | GO:0009809: lignin biosynthetic process | 3.89E-02 |
| 125 | GO:0008152: metabolic process | 3.89E-02 |
| 126 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.98E-02 |
| 127 | GO:0010224: response to UV-B | 3.98E-02 |
| 128 | GO:0009620: response to fungus | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 2 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 3 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 4 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 5 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 6 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 8 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 9 | GO:0004399: histidinol dehydrogenase activity | 0.00E+00 |
| 10 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 11 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 8.93E-06 |
| 12 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 4.09E-05 |
| 13 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 1.44E-04 |
| 14 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.44E-04 |
| 15 | GO:0046480: galactolipid galactosyltransferase activity | 1.44E-04 |
| 16 | GO:0080079: cellobiose glucosidase activity | 1.44E-04 |
| 17 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 1.44E-04 |
| 18 | GO:0016780: phosphotransferase activity, for other substituted phosphate groups | 1.44E-04 |
| 19 | GO:0010313: phytochrome binding | 1.44E-04 |
| 20 | GO:0004001: adenosine kinase activity | 1.44E-04 |
| 21 | GO:0004793: threonine aldolase activity | 1.44E-04 |
| 22 | GO:0016783: sulfurtransferase activity | 1.44E-04 |
| 23 | GO:0004307: ethanolaminephosphotransferase activity | 1.44E-04 |
| 24 | GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | 1.44E-04 |
| 25 | GO:0008732: L-allo-threonine aldolase activity | 1.44E-04 |
| 26 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.29E-04 |
| 27 | GO:0043425: bHLH transcription factor binding | 3.29E-04 |
| 28 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 3.29E-04 |
| 29 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 3.29E-04 |
| 30 | GO:0033201: alpha-1,4-glucan synthase activity | 3.29E-04 |
| 31 | GO:0050347: trans-octaprenyltranstransferase activity | 3.29E-04 |
| 32 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 3.29E-04 |
| 33 | GO:0030572: phosphatidyltransferase activity | 3.29E-04 |
| 34 | GO:0004142: diacylglycerol cholinephosphotransferase activity | 3.29E-04 |
| 35 | GO:0009973: adenylyl-sulfate reductase activity | 3.29E-04 |
| 36 | GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding | 3.29E-04 |
| 37 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 3.29E-04 |
| 38 | GO:0004061: arylformamidase activity | 3.29E-04 |
| 39 | GO:0004614: phosphoglucomutase activity | 3.29E-04 |
| 40 | GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding | 5.40E-04 |
| 41 | GO:0004180: carboxypeptidase activity | 5.40E-04 |
| 42 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 5.40E-04 |
| 43 | GO:0004373: glycogen (starch) synthase activity | 5.40E-04 |
| 44 | GO:0003935: GTP cyclohydrolase II activity | 5.40E-04 |
| 45 | GO:0008020: G-protein coupled photoreceptor activity | 5.40E-04 |
| 46 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 5.40E-04 |
| 47 | GO:0000254: C-4 methylsterol oxidase activity | 7.73E-04 |
| 48 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.73E-04 |
| 49 | GO:0048027: mRNA 5'-UTR binding | 7.73E-04 |
| 50 | GO:0004792: thiosulfate sulfurtransferase activity | 7.73E-04 |
| 51 | GO:0003883: CTP synthase activity | 7.73E-04 |
| 52 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 7.73E-04 |
| 53 | GO:0019104: DNA N-glycosylase activity | 1.02E-03 |
| 54 | GO:0009011: starch synthase activity | 1.02E-03 |
| 55 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 1.29E-03 |
| 56 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 1.29E-03 |
| 57 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.59E-03 |
| 58 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.59E-03 |
| 59 | GO:0016161: beta-amylase activity | 1.91E-03 |
| 60 | GO:0005261: cation channel activity | 1.91E-03 |
| 61 | GO:0008236: serine-type peptidase activity | 2.20E-03 |
| 62 | GO:0004427: inorganic diphosphatase activity | 2.24E-03 |
| 63 | GO:0016621: cinnamoyl-CoA reductase activity | 2.24E-03 |
| 64 | GO:0009881: photoreceptor activity | 2.24E-03 |
| 65 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 2.60E-03 |
| 66 | GO:0004034: aldose 1-epimerase activity | 2.60E-03 |
| 67 | GO:0046914: transition metal ion binding | 2.96E-03 |
| 68 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.35E-03 |
| 69 | GO:0016491: oxidoreductase activity | 4.15E-03 |
| 70 | GO:0004673: protein histidine kinase activity | 4.18E-03 |
| 71 | GO:0008378: galactosyltransferase activity | 5.06E-03 |
| 72 | GO:0000155: phosphorelay sensor kinase activity | 5.52E-03 |
| 73 | GO:0015266: protein channel activity | 5.52E-03 |
| 74 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.00E-03 |
| 75 | GO:0030552: cAMP binding | 6.50E-03 |
| 76 | GO:0030553: cGMP binding | 6.50E-03 |
| 77 | GO:0005216: ion channel activity | 8.06E-03 |
| 78 | GO:0004176: ATP-dependent peptidase activity | 8.61E-03 |
| 79 | GO:0030170: pyridoxal phosphate binding | 9.99E-03 |
| 80 | GO:0005249: voltage-gated potassium channel activity | 1.16E-02 |
| 81 | GO:0030551: cyclic nucleotide binding | 1.16E-02 |
| 82 | GO:0046873: metal ion transmembrane transporter activity | 1.22E-02 |
| 83 | GO:0016853: isomerase activity | 1.28E-02 |
| 84 | GO:0050662: coenzyme binding | 1.28E-02 |
| 85 | GO:0048038: quinone binding | 1.41E-02 |
| 86 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.41E-02 |
| 87 | GO:0004197: cysteine-type endopeptidase activity | 1.48E-02 |
| 88 | GO:0004518: nuclease activity | 1.48E-02 |
| 89 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.55E-02 |
| 90 | GO:0042802: identical protein binding | 1.58E-02 |
| 91 | GO:0008483: transaminase activity | 1.69E-02 |
| 92 | GO:0008237: metallopeptidase activity | 1.69E-02 |
| 93 | GO:0016413: O-acetyltransferase activity | 1.76E-02 |
| 94 | GO:0016597: amino acid binding | 1.76E-02 |
| 95 | GO:0000287: magnesium ion binding | 1.89E-02 |
| 96 | GO:0016168: chlorophyll binding | 1.91E-02 |
| 97 | GO:0030247: polysaccharide binding | 2.06E-02 |
| 98 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.22E-02 |
| 99 | GO:0004222: metalloendopeptidase activity | 2.38E-02 |
| 100 | GO:0061630: ubiquitin protein ligase activity | 2.52E-02 |
| 101 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.63E-02 |
| 102 | GO:0008422: beta-glucosidase activity | 2.80E-02 |
| 103 | GO:0004871: signal transducer activity | 3.00E-02 |
| 104 | GO:0004364: glutathione transferase activity | 3.06E-02 |
| 105 | GO:0016787: hydrolase activity | 3.10E-02 |
| 106 | GO:0004185: serine-type carboxypeptidase activity | 3.15E-02 |
| 107 | GO:0051287: NAD binding | 3.60E-02 |
| 108 | GO:0046872: metal ion binding | 3.91E-02 |
| 109 | GO:0016298: lipase activity | 3.98E-02 |
| 110 | GO:0031625: ubiquitin protein ligase binding | 4.18E-02 |
| 111 | GO:0008234: cysteine-type peptidase activity | 4.18E-02 |
| 112 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.48E-02 |
| 113 | GO:0022857: transmembrane transporter activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.40E-07 |
| 2 | GO:0005747: mitochondrial respiratory chain complex I | 5.18E-06 |
| 3 | GO:0009536: plastid | 4.18E-05 |
| 4 | GO:0009501: amyloplast | 9.94E-05 |
| 5 | GO:0000152: nuclear ubiquitin ligase complex | 1.44E-04 |
| 6 | GO:0005764: lysosome | 3.77E-04 |
| 7 | GO:0005960: glycine cleavage complex | 7.73E-04 |
| 8 | GO:0031969: chloroplast membrane | 7.99E-04 |
| 9 | GO:0009527: plastid outer membrane | 1.02E-03 |
| 10 | GO:0031372: UBC13-MMS2 complex | 1.02E-03 |
| 11 | GO:0016593: Cdc73/Paf1 complex | 1.02E-03 |
| 12 | GO:0009526: plastid envelope | 1.02E-03 |
| 13 | GO:0010319: stromule | 1.59E-03 |
| 14 | GO:0005829: cytosol | 2.03E-03 |
| 15 | GO:0031359: integral component of chloroplast outer membrane | 2.24E-03 |
| 16 | GO:0009570: chloroplast stroma | 3.34E-03 |
| 17 | GO:0042644: chloroplast nucleoid | 3.35E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.35E-03 |
| 19 | GO:0016604: nuclear body | 3.76E-03 |
| 20 | GO:0005884: actin filament | 4.61E-03 |
| 21 | GO:0005758: mitochondrial intermembrane space | 7.52E-03 |
| 22 | GO:0045271: respiratory chain complex I | 8.06E-03 |
| 23 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.03E-02 |
| 24 | GO:0009535: chloroplast thylakoid membrane | 1.05E-02 |
| 25 | GO:0009523: photosystem II | 1.35E-02 |
| 26 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.12E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 2.22E-02 |
| 28 | GO:0005783: endoplasmic reticulum | 2.81E-02 |
| 29 | GO:0031966: mitochondrial membrane | 3.70E-02 |
| 30 | GO:0016607: nuclear speck | 4.48E-02 |
| 31 | GO:0005834: heterotrimeric G-protein complex | 4.58E-02 |