Gene: AT2G42790
Gene description
TAIR ID: AT2G42790
Short description: citrate synthase 3
Pathogen responsiveness: -0.92
General responsiveness: -0.17
GO biological process
tricarboxylic acid cycle, fatty acid beta-oxidation
GO cellular component
peroxisome
GO molecular function
citrate (Si)-synthase activity
KEGG pathway
PATH:ath01200: Carbon metabolism
PATH:ath01210: 2-Oxocarboxylic acid metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00020: Citrate cycle (TCA cycle)
PATH:ath00630: Glyoxylate and dicarboxylate metabolism
Transcriptional regulation
Regulator:
AT4G24540, AT2G45660, AT1G24260, AT4G36990, AT2G22540
Target:
none
Protein-protein interaction network
The number of partners (degree) is: 19 (Top10%)
click to view PPI networkCoexpression network
Differentially expressed condition 
10 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Laer, control | Laer, PstDC3000 12 h | 1.52 | 7.04E-07 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 2.54 | 2.48E-11 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | 1.55 | 1.60E-07 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | 1.53 | 1.67E-07 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | 1.72 | 2.58E-08 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 1.99 | 1.09E-09 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -2.10 | 2.89E-04 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.63 | 6.35E-05 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 2.04 | 4.25E-06 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | -2.14 | 9.19E-03 |
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