gene detail

Gene description

TAIR ID: AT5G05410

Short description: DRE-binding protein 2A

Pathogen responsiveness: 0.46

General responsiveness: 2.73

Orthologous

Rice:

OS01G0165000

Maize:

GRMZM2G006745

Wheat: No orthologous gene

GO biological process

positive regulation of transcription, DNA-templated, response to water deprivation, heat acclimation, response to heat, response to hydrogen peroxide, regulation of transcription, response to UV-B, transcription

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G53660, AT5G11260, AT3G09290

Target:
AT5G18360, AT4G33330, AT2G22900, AT1G04240, AT3G59520, AT4G33720, AT4G01703, AT1G19530, AT3G21475, AT5G17420, AT1G48830, AT5G64960, AT3G03190, AT5G59720, AT3G21480, AT4G14785, AT3G33109, AT5G21910, AT5G13180, AT1G67920, AT4G32190, AT1G30490, AT3G43230, AT3G05980, AT5G17030, AT3G12580, AT3G51750, AT4G21605, AT4G37770, AT5G57660, AT2G29730, AT1G57740, AT5G52300, AT1G34240, AT5G52310, AT1G52690, AT5G10625, AT2G20810, AT2G40860, AT1G05190, AT5G42570, AT5G41280, AT1G52270, AT5G28860, AT2G38420, AT1G19410, AT4G00710, AT4G27840, AT2G41190, AT4G26940, AT3G31909, AT3G45600, AT3G16840, AT3G06778, AT4G24170, AT2G40880, AT3G61827, AT3G17520, AT2G33700, AT1G80380, AT5G12870, AT1G59760, AT3G44130, AT4G08455, AT4G28460, AT1G62333, AT5G15960, AT3G12950, AT1G54470, AT2G42540, AT5G59385, AT5G15970, AT1G01470, AT2G22010, AT3G63340, AT4G12000, AT3G50970, AT2G27300, AT4G19680, AT1G48840, AT3G18340, AT2G30870, AT3G28223, AT5G49910, AT5G37580, AT3G01930, AT2G22810, AT1G76062, AT2G20890, AT1G59750, AT5G50990, AT1G71930, AT4G15450, AT4G01090, AT2G12250, AT3G28230

Protein-protein interaction network

The number of partners (degree) is: 35 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

26 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	3.05	2.02E-05
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.22	9.69E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.46	8.22E-06
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	2.57	4.84E-05
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	1.87	4.90E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.66	1.78E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.80	4.17E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.02	2.43E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.62	2.49E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.65	1.95E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.97	1.10E-09
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.97	6.42E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.16	6.82E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.61	1.74E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.11	3.03E-05
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.61	2.96E-03
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.22	1.52E-05
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	2.24	2.71E-05
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.03	7.18E-05
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.84	2.76E-04
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.52	6.07E-03
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.52	7.04E-03
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.62	1.89E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.98	1.23E-02
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.70	1.91E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.76	1.10E-07