Gene: AT5G57660
     


Gene description


TAIR ID: AT5G57660

Short description: CONSTANS-like 5

Pathogen responsiveness: -0.33

General responsiveness: 0.74

Orthologous


Rice:

OS04G0497700   OS02G0610500   OS06G0275000  

Maize: No orthologous gene
Wheat:

TA.557.1.S1_AT  


GO biological process


regulation of transcription, DNA-templated, response to light stimulus, regulation of flower development


GO cellular component


nucleus


GO molecular function


zinc ion binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00643, B-box zinc finger
PfamPF06203, CCT motif
SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G25480, AT5G13790, AT5G05410, AT3G24050, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-3.601.61E-13
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-3.716.67E-14
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.252.23E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.481.12E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.013.81E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.617.87E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.673.75E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.844.78E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.671.49E-07






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