Gene: AT1G05190
     

Gene description


TAIR ID: AT1G05190

Short description: Ribosomal protein L6 family

Pathogen responsiveness: -0.08

General responsiveness: 2.26

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G170870  

Wheat: No orthologous gene

GO biological process


embryo development ending in seed dormancy, response to cytokinin, translation


GO cellular component


chloroplast envelope, chloroplast stroma, chloroplast, large ribosomal subunit, ribosome, membrane


GO molecular function


RNA binding, rRNA binding


Protein domain


PfamPF00347, Ribosomal protein L6

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G25480, AT5G05410, AT3G24050, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.106.15E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.701.25E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.071.49E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.821.91E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.664.47E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.225.15E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.412.74E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.594.19E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.319.92E-12
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.793.31E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.012.54E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.671.40E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.021.94E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.431.83E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.541.83E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.582.27E-06
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.861.32E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.892.91E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.851.98E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.582.27E-05






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