Gene: AT5G52300
     

Gene description


TAIR ID: AT5G52300

Short description: CAP160 protein

Pathogen responsiveness: -0.84

General responsiveness: 1.60

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to salt stress, response to abscisic acid, response to water deprivation, leaf senescence, response to cold, abscisic acid-activated signaling pathway


GO cellular component


cytoplasm


GO molecular function


molecular_function


Protein domain


PfamPF07918, CAP160 repeat

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G52890, AT3G15210, AT5G05410, AT4G34000, AT3G19290, AT1G45249

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.648.47E-09
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.261.51E-02
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-2.662.49E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-6.414.12E-13
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.997.07E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.662.27E-02






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