Gene: AT2G42540
     

Gene description


TAIR ID: AT2G42540

Short description: cold-regulated 15a

Pathogen responsiveness: 0.77

General responsiveness: 2.46

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


leaf senescence, protein oligomerization, cold acclimation, circadian rhythm, response to light stimulus, plastid inner membrane organization, response to cold, response to water deprivation, drought recovery, red or far-red light signaling pathway, response to osmotic stress, response to abscisic acid, response to salt stress, response to freezing, protein stabilization, protein homooligomerization, heat acclimation, response to high light intensity


GO cellular component


chloroplast stroma, chloroplast, chloroplast envelope


GO molecular function


lipid binding, galactose binding


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G25480, AT4G25490, AT1G12610, AT5G05410, AT1G35515, AT1G46768, AT1G24260, AT5G51990, AT5G61850, AT3G26744, AT4G25470

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.842.41E-04
GSE17464Penta, controlPenta, PstDC3000 12 h2.832.17E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.103.11E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.121.88E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.487.02E-05
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h-1.927.64E-15
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h-1.763.17E-14
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-1.552.77E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-5.081.30E-15
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.952.09E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-5.061.15E-15
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-3.183.30E-12
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.729.26E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-1.661.76E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.567.02E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.816.99E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.872.36E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.583.14E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.523.60E-03
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-2.336.86E-03
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-2.072.12E-02
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-3.541.45E-05
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.681.25E-03
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h-1.792.95E-02
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d-1.521.32E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.749.16E-03






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