Gene: AT3G46640
     

Gene description


TAIR ID: AT3G46640

Short description: Homeodomain-like superfamily protein

Pathogen responsiveness: 0.61

General responsiveness: 0.05

Orthologous


Rice:

OS01G0971800  

Maize:

GRMZM2G067702  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription, regulation of gene expression, circadian rhythm, positive regulation of circadian rhythm


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h6.791.38E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h7.412.37E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h5.161.31E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h6.203.41E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.661.59E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.407.06E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.591.82E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.741.55E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.912.42E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.812.98E-11
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.073.60E-13
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.422.71E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.762.66E-04






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