Gene: AT2G40080
     

Gene description


TAIR ID: AT2G40080

Short description: Protein of unknown function (DUF1313)

Pathogen responsiveness: 0.87

General responsiveness: 1.03

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of flower development, photoperiodism, red, far-red light phototransduction, positive regulation of circadian rhythm, entrainment of circadian clock, red or far-red light signaling pathway, flowering, flower development, rhythmic process, response to red light, response to karrikin


GO cellular component


nucleus


GO molecular function


protein homodimerization activity


Protein domain


PfamPF07011, Protein of unknown function (DUF1313)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G46640, AT4G15090, AT2G46830, AT3G14230, AT3G22170, AT5G11260, AT4G36990, AT1G01060

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 19 (Top10%)

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.573.24E-02
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.543.18E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h6.851.33E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h8.233.10E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.552.07E-02
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h5.371.01E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h6.739.37E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.181.49E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h4.374.96E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.671.16E-14
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.612.30E-09






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