Gene: AT1G80840
     

Gene description


TAIR ID: AT1G80840

Short description: WRKY DNA-binding protein 40

Pathogen responsiveness: 2.79

General responsiveness: 1.86

GO biological process


regulation of transcription, DNA-templated, defense response to fungus, response to molecule of bacterial origin, response to salicylic acid, negative regulation of transcription, defense response to bacterium, regulation of defense response to virus by host, response to wounding, response to chitin, regulation of defense response, transcription


GO cellular component


nucleus


GO molecular function


sequence-specific DNA binding, protein binding, transcription factor activity, transcription regulatory region DNA binding


Protein domain


PfamPF03106, WRKY DNA -binding domain
SMARTSM00774, WRKY

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
AT2G27960, AT5G66090, AT4G13955, AT4G13095, AT5G47970, AT5G59410, AT5G65687, AT1G24267, AT4G29285, AT3G21650, AT5G28888, AT5G14300, AT5G64905, AT3G42340, AT4G00610, AT2G02470, AT3G45790, AT4G06560, AT4G04105, AT1G11050, AT4G12090, AT2G17690, AT2G23240, AT1G18382, AT1G24350, AT2G42330, AT1G35515, AT1G49590, AT5G44070, AT1G60600, AT3G30120, AT3G46680, AT4G26190, AT2G10440, AT1G09940, AT1G30370, AT4G26610, AT3G16340, AT4G02410, AT4G15120, AT3G04735, AT1G61730, AT4G05200, AT5G13490, AT4G16370, AT1G11362, AT5G37250, AT5G65165, AT1G07485, AT5G64660, AT1G23350, AT1G67490, AT3G29786, AT5G13485, AT3G17150, AT3G62100, AT5G39895, AT2G39460, AT2G01830, AT3G49601, AT4G24380, AT4G00760, AT2G42450, AT4G24130, AT3G21630, AT1G19070, AT4G25700, AT5G66080, AT3G46140, AT1G22700, AT5G14105, AT1G20610, AT3G18710, AT3G42790, AT1G01350, AT1G24360, AT4G37020, AT1G26300, AT4G25520, AT2G18180, AT2G33130, AT3G30852, AT4G01610, AT2G07696, AT2G44520, AT2G26560, AT1G27921, AT5G38900, AT2G29610, AT5G46740, AT1G13680, AT3G55677, AT4G31020, AT1G24062, AT5G48690, AT1G79000, AT4G05210, AT3G29305, AT2G28780, AT5G53905, AT5G37870, AT2G29310, AT1G61860, AT2G41640, AT4G24370, AT1G75120, AT1G28700, AT5G46250, AT1G74830, AT1G32340, AT5G22450, AT3G46930, AT4G24290, AT1G66870, AT5G21090, AT4G30070, AT2G07786, AT1G02610, AT5G54215, AT2G33190, AT1G25220, AT1G07473, AT2G22530, AT4G13950, AT2G13800, AT3G01326, AT4G40020, AT3G22520, AT4G14450, AT5G59420, AT1G66855, AT3G45965, AT1G66680, AT3G29310, AT2G15160, AT1G07476, AT5G38905, AT5G63700, AT3G07200, AT2G26870

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


91 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.523.40E-05
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.451.49E-06
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d1.751.44E-03
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h1.904.85E-04
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.472.79E-06
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h1.682.16E-03
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min4.302.78E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min3.952.84E-02
GSE17464Laer, controlLaer, Flg22 1 h3.511.44E-04
GSE17464Laer, controlLaer, Flg22 2 h2.594.17E-03
GSE17464Penta, controlPenta, Flg22 2 h2.911.51E-03
GSE17464Penta, controlPenta, Flg22 2 h2.554.71E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h3.012.95E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h3.593.28E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.992.49E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h3.419.00E-13
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.272.97E-10
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h1.885.84E-09
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h5.322.35E-11
GSE2169Col, WT, waterCol, WT, chitin 30 min2.007.59E-05
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.611.63E-06
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.522.46E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.505.06E-03
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.601.38E-08
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.572.26E-08
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d1.925.05E-03
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d2.121.37E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.902.58E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.834.00E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.541.56E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.641.50E-02
GSE37921Col, WT, controlCol, WT, CMV2.245.06E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt23.111.88E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.991.09E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.343.05E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.533.83E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.742.10E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h5.175.37E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h5.356.89E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h4.386.41E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h6.001.19E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.316.91E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h6.061.71E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.222.12E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h6.512.38E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h5.735.99E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.748.92E-05
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.901.39E-02
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h6.466.66E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h4.434.23E-12
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h5.205.34E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h4.052.45E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h4.283.43E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.687.63E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h3.653.86E-12
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.388.14E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.642.26E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.164.19E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.372.88E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.741.75E-03
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.939.56E-09
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.702.20E-03
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.692.18E-03
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h1.521.63E-02
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.266.12E-05
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h2.013.83E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h3.033.30E-08
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h2.294.48E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h3.169.30E-09
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h2.583.12E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h3.304.64E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.621.02E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.562.44E-03
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.803.25E-04
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.671.76E-03
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.561.42E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.882.50E-10
GSE5615Col, WT, water 4 hCol, WT, LPS 4 h1.532.38E-02
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h2.461.19E-03
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h4.481.58E-06
GSE5685Col, WT, control 24 hCol, WT, Ps ES4326 24 h1.921.61E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.604.99E-06
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.772.67E-02
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d3.096.21E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.958.95E-16
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h5.183.74E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.707.03E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min4.163.52E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h4.858.03E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h4.482.72E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min3.731.89E-03






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