gene detail

Gene description

TAIR ID: AT2G17690

Short description: F-box family protein with a domain of unknown function (DUF295)

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TAAFFX.121382.1.S1_AT

GO biological process

response to heat, double-strand break repair via homologous recombination

GO cellular component

cytoplasm, nucleus, chromosome

GO molecular function

ATP-dependent 3'-5' DNA helicase activity, four-way junction helicase activity, DNA binding, molecular_function

Protein domain

Pfam	PF03478, Protein of unknown function (DUF295)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G01900, AT4G31800, AT1G80840

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.88	9.53E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-5.06	1.70E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-5.46	6.09E-06