gene detail

Gene description

TAIR ID: AT5G59420

Short description: OSBP(oxysterol binding protein)-related protein 3C

Pathogen responsiveness: -0.98

General responsiveness: -2.33

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G174644

Wheat: No orthologous gene

GO biological process

lipid transport, metabolic process, steroid metabolic process

GO cellular component

nucleus, cytosol

GO molecular function

hydrolase activity, lipid binding

Protein domain

Pfam	PF01237, Oxysterol-binding protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G01900, AT5G61850, AT4G31800, AT1G80840

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.62	3.07E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.19	2.54E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.58	3.87E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.58	3.15E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.91	1.76E-11