Gene: AT2G27960
     


Gene description


TAIR ID: AT2G27960

Short description: cyclin-dependent kinase-subunit 1

Pathogen responsiveness: -1.77

General responsiveness: -1.96

Orthologous


Rice:

OS03G0146300  

Maize:

GRMZM2G038485  

Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, positive regulation of cyclin-dependent protein serine/threonine kinase activity, cell division, mitotic cell cycle, DNA endoreduplication, regulation of mitotic cell cycle, regulation of cell cycle


GO cellular component


SCF ubiquitin ligase complex, nucleus, cytoplasm, cyclin-dependent protein kinase holoenzyme complex


GO molecular function


protein binding, cyclin-dependent protein serine/threonine kinase activator activity, cyclin-dependent protein serine/threonine kinase activity, protein kinase binding, ubiquitin binding, histone binding


Protein domain


PfamPF01111, Cyclin-dependent kinase regulatory subunit
SMARTSM01084, CKS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G01900, AT4G31800, AT1G80840

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 52 (Top5%)

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.513.16E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.518.00E-14






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