Gene: AT3G42790
     

Gene description


TAIR ID: AT3G42790

Short description: alfin-like 3

Pathogen responsiveness: -1.61

General responsiveness: -2.26

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, covalent chromatin modification, transcription


GO cellular component


nucleus


GO molecular function


metal ion binding, histone binding


Protein domain


PfamPF12165, Alfin
PfamPF00628, PHD-finger
SMARTSM00249, PHD

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT5G13790, AT5G01900, AT4G18770, AT5G22570, AT2G46130, AT5G61850, AT4G31800, AT1G80840

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.577.09E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.574.13E-02






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