gene detail

Gene description

TAIR ID: AT3G21630

Short description: chitin elicitor receptor kinase 1

Pathogen responsiveness: 0.12

General responsiveness: -1.33

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G317770

Wheat: No orthologous gene

GO biological process

cellular response to molecule of bacterial origin, defense response to bacterium, detection of peptidoglycan, defense response to fungus, incompatible interaction, protein autophosphorylation, protein phosphorylation, innate immune response, cellular response to chitin, cell surface pattern recognition receptor signaling pathway, detection of molecule of fungal origin, response to chitin

GO cellular component

extracellular region, plasma membrane, integral component of membrane

GO molecular function

protein homodimerization activity, protein kinase activity, protein binding, transmembrane receptor protein kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, chitin binding, chitosan binding, identical protein binding, intracellular signal transduction

Protein domain

Pfam	PF01476, LysM domain
Pfam	PF07714, Protein tyrosine kinase
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT5G01900, AT1G62300, AT4G31800, AT1G80840

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 64 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.66	9.91E-03
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.90	2.99E-02
GSE17464	Laer, control	Laer, Flg22 1 h	2.19	3.47E-08
GSE17464	Laer, control	Laer, Flg22 2 h	1.94	1.07E-06
GSE17464	Penta, control	Penta, Flg22 2 h	1.93	3.58E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.70	8.04E-06
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.77	6.00E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.55	1.41E-02
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.61	2.75E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.33	3.48E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.28	7.31E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.74	2.26E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.15	1.46E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.11	1.24E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.54	1.12E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.03	8.42E-11
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.33	6.52E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.44	2.73E-12
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.75	9.78E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.62	7.73E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.93	2.15E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.79	3.96E-04