gene detail

Gene description

TAIR ID: AT3G18710

Short description: plant U-box 29

Pathogen responsiveness: 0.74

General responsiveness: -0.27

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein ubiquitination, response to chitin

GO cellular component

plasmodesma, cytoplasm

GO molecular function

transmembrane receptor protein serine/threonine kinase binding, ubiquitin-protein transferase activity

Protein domain

Pfam	PF04564, U-box domain
SMART	SM00504, Ubox

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

Differentially expressed condition

23 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	5.78	1.32E-02
GSE17464	Penta, control	Penta, Flg22 2 h	4.46	4.58E-08
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	4.38	8.51E-14
GSE2169	Col, WT, water	Col, WT, chitin 30 min	4.32	1.53E-13
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	4.26	1.46E-13
GSE17464	Laer, control	Laer, Flg22 1 h	3.81	1.17E-06
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	3.70	2.89E-02
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	3.60	1.20E-08
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	3.37	2.38E-08
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	3.08	9.29E-05

Showing 1 to 10 of 23 entries