gene detail

Gene description

TAIR ID: AT5G48930

Short description: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase

Pathogen responsiveness: -1.41

General responsiveness: -1.02

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G158083

Wheat:

TAAFFX.120386.1.S1_AT

GO biological process

lignin biosynthetic process, cell wall organization, auxin homeostasis, positive regulation of flavonoid biosynthetic process

GO cellular component

cytoplasm, membrane, cytosol

GO molecular function

shikimate O-hydroxycinnamoyltransferase activity, transferase activity, quinate O-hydroxycinnamoyltransferase activity

Protein domain

Pfam	PF02458, Transferase family

Metabolic pathway

PWY-6040: chlorogenic acid biosynthesis II
PWY-361: phenylpropanoid biosynthesis
PWY-6039: chlorogenic acid biosynthesis I
PWY-5868: simple coumarins biosynthesis

KEGG pathway

PATH:ath00940: Phenylpropanoid biosynthesis
PATH:ath00945: Stilbenoid, diarylheptanoid and gingerol biosynthesis
PATH:ath00941: Flavonoid biosynthesis

Transcriptional regulation

Regulator:
AT1G51600, AT1G12610, AT1G77450, AT1G22640, AT5G13790, AT5G48150, AT1G63910, AT2G41070, AT2G36270, AT1G54060, AT5G60850, AT5G11260, AT1G53910, AT5G18270, AT1G24260, AT5G63790, AT5G54680, AT4G37260, AT1G79180, AT1G06180, AT1G16490, AT1G12630, AT4G36990, AT4G22680, AT5G26660, AT1G20910, AT1G66230, AT3G08500

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.84	1.22E-07
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.52	7.56E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	1.69	1.78E-03