co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015833: peptide transport	0.00E+00
2	GO:1990641: response to iron ion starvation	7.07E-05
3	GO:0015812: gamma-aminobutyric acid transport	7.07E-05
4	GO:0046167: glycerol-3-phosphate biosynthetic process	7.07E-05
5	GO:0009970: cellular response to sulfate starvation	7.72E-05
6	GO:0006995: cellular response to nitrogen starvation	7.72E-05
7	GO:0002237: response to molecule of bacterial origin	1.41E-04
8	GO:0006641: triglyceride metabolic process	1.70E-04
9	GO:0009727: detection of ethylene stimulus	1.70E-04
10	GO:0006101: citrate metabolic process	1.70E-04
11	GO:0042939: tripeptide transport	1.70E-04
12	GO:0030187: melatonin biosynthetic process	1.70E-04
13	GO:0009308: amine metabolic process	1.70E-04
14	GO:0019222: regulation of metabolic process	1.70E-04
15	GO:0006954: inflammatory response	2.86E-04
16	GO:0019563: glycerol catabolic process	2.86E-04
17	GO:1900140: regulation of seedling development	2.86E-04
18	GO:0090630: activation of GTPase activity	2.86E-04
19	GO:0009410: response to xenobiotic stimulus	2.86E-04
20	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2.86E-04
21	GO:0006072: glycerol-3-phosphate metabolic process	4.15E-04
22	GO:0006809: nitric oxide biosynthetic process	4.15E-04
23	GO:0009399: nitrogen fixation	4.15E-04
24	GO:0006882: cellular zinc ion homeostasis	4.15E-04
25	GO:0010188: response to microbial phytotoxin	5.53E-04
26	GO:0006878: cellular copper ion homeostasis	5.53E-04
27	GO:0042938: dipeptide transport	5.53E-04
28	GO:0006542: glutamine biosynthetic process	5.53E-04
29	GO:0051365: cellular response to potassium ion starvation	5.53E-04
30	GO:0042732: D-xylose metabolic process	8.57E-04
31	GO:0000741: karyogamy	8.57E-04
32	GO:0050665: hydrogen peroxide biosynthetic process	8.57E-04
33	GO:0031930: mitochondria-nucleus signaling pathway	1.02E-03
34	GO:0010044: response to aluminum ion	1.19E-03
35	GO:0009395: phospholipid catabolic process	1.19E-03
36	GO:0006099: tricarboxylic acid cycle	1.20E-03
37	GO:0080167: response to karrikin	1.32E-03
38	GO:0009061: anaerobic respiration	1.37E-03
39	GO:0009690: cytokinin metabolic process	1.37E-03
40	GO:0006102: isocitrate metabolic process	1.37E-03
41	GO:0006644: phospholipid metabolic process	1.37E-03
42	GO:0006098: pentose-phosphate shunt	1.76E-03
43	GO:0051555: flavonol biosynthetic process	2.19E-03
44	GO:0055062: phosphate ion homeostasis	2.19E-03
45	GO:0006535: cysteine biosynthetic process from serine	2.19E-03
46	GO:0009641: shade avoidance	2.19E-03
47	GO:0052544: defense response by callose deposition in cell wall	2.41E-03
48	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.64E-03
49	GO:0006396: RNA processing	2.86E-03
50	GO:2000012: regulation of auxin polar transport	2.88E-03
51	GO:0050826: response to freezing	2.88E-03
52	GO:0034976: response to endoplasmic reticulum stress	3.63E-03
53	GO:0009409: response to cold	3.64E-03
54	GO:0045333: cellular respiration	3.89E-03
55	GO:0019344: cysteine biosynthetic process	3.89E-03
56	GO:0016036: cellular response to phosphate starvation	4.44E-03
57	GO:0003333: amino acid transmembrane transport	4.44E-03
58	GO:0055114: oxidation-reduction process	4.71E-03
59	GO:0001944: vasculature development	5.02E-03
60	GO:0009625: response to insect	5.02E-03
61	GO:0010227: floral organ abscission	5.02E-03
62	GO:0042391: regulation of membrane potential	5.93E-03
63	GO:0010197: polar nucleus fusion	6.24E-03
64	GO:0010182: sugar mediated signaling pathway	6.24E-03
65	GO:0006623: protein targeting to vacuole	6.89E-03
66	GO:0008654: phospholipid biosynthetic process	6.89E-03
67	GO:0007165: signal transduction	6.99E-03
68	GO:0006635: fatty acid beta-oxidation	7.22E-03
69	GO:0071281: cellular response to iron ion	7.90E-03
70	GO:0006914: autophagy	8.25E-03
71	GO:0044550: secondary metabolite biosynthetic process	9.93E-03
72	GO:0009627: systemic acquired resistance	1.01E-02
73	GO:0042128: nitrate assimilation	1.01E-02
74	GO:0016049: cell growth	1.09E-02
75	GO:0048481: plant ovule development	1.13E-02
76	GO:0006811: ion transport	1.21E-02
77	GO:0009631: cold acclimation	1.25E-02
78	GO:0010119: regulation of stomatal movement	1.25E-02
79	GO:0006865: amino acid transport	1.29E-02
80	GO:0016051: carbohydrate biosynthetic process	1.33E-02
81	GO:0042542: response to hydrogen peroxide	1.55E-02
82	GO:0009640: photomorphogenesis	1.59E-02
83	GO:0051707: response to other organism	1.59E-02
84	GO:0008643: carbohydrate transport	1.68E-02
85	GO:0009873: ethylene-activated signaling pathway	1.75E-02
86	GO:0000165: MAPK cascade	1.82E-02
87	GO:0009809: lignin biosynthetic process	1.97E-02
88	GO:0006857: oligopeptide transport	2.06E-02
89	GO:0048367: shoot system development	2.26E-02
90	GO:0035556: intracellular signal transduction	2.54E-02
91	GO:0018105: peptidyl-serine phosphorylation	2.58E-02
92	GO:0042744: hydrogen peroxide catabolic process	3.25E-02
93	GO:0009790: embryo development	3.31E-02
94	GO:0016310: phosphorylation	3.37E-02
95	GO:0010150: leaf senescence	3.73E-02
96	GO:0009739: response to gibberellin	4.04E-02
97	GO:0006470: protein dephosphorylation	4.10E-02
98	GO:0010468: regulation of gene expression	4.23E-02
99	GO:0009617: response to bacterium	4.23E-02
100	GO:0042742: defense response to bacterium	4.84E-02
101	GO:0006468: protein phosphorylation	4.89E-02
102	GO:0009826: unidimensional cell growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
2	GO:0009045: xylose isomerase activity	0.00E+00
3	GO:0015197: peptide transporter activity	0.00E+00
4	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
5	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
6	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
7	GO:0004370: glycerol kinase activity	0.00E+00
8	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
9	GO:0004525: ribonuclease III activity	3.30E-05
10	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	7.07E-05
11	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	7.07E-05
12	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	7.07E-05
13	GO:0050200: plasmalogen synthase activity	7.07E-05
14	GO:0052595: aliphatic-amine oxidase activity	7.07E-05
15	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	7.07E-05
16	GO:0017096: acetylserotonin O-methyltransferase activity	7.07E-05
17	GO:0038199: ethylene receptor activity	1.70E-04
18	GO:0019200: carbohydrate kinase activity	1.70E-04
19	GO:0042937: tripeptide transporter activity	1.70E-04
20	GO:0015180: L-alanine transmembrane transporter activity	1.70E-04
21	GO:0004566: beta-glucuronidase activity	1.70E-04
22	GO:0003994: aconitate hydratase activity	1.70E-04
23	GO:0004096: catalase activity	2.86E-04
24	GO:0048027: mRNA 5'-UTR binding	4.15E-04
25	GO:0015181: arginine transmembrane transporter activity	4.15E-04
26	GO:0004108: citrate (Si)-synthase activity	4.15E-04
27	GO:0051740: ethylene binding	4.15E-04
28	GO:0009001: serine O-acetyltransferase activity	4.15E-04
29	GO:0015189: L-lysine transmembrane transporter activity	4.15E-04
30	GO:0005313: L-glutamate transmembrane transporter activity	5.53E-04
31	GO:0009916: alternative oxidase activity	5.53E-04
32	GO:0042936: dipeptide transporter activity	5.53E-04
33	GO:0002020: protease binding	7.00E-04
34	GO:0004356: glutamate-ammonia ligase activity	7.00E-04
35	GO:0050897: cobalt ion binding	1.05E-03
36	GO:0000989: transcription factor activity, transcription factor binding	1.76E-03
37	GO:0045309: protein phosphorylated amino acid binding	1.97E-03
38	GO:0015171: amino acid transmembrane transporter activity	2.17E-03
39	GO:0004673: protein histidine kinase activity	2.19E-03
40	GO:0015020: glucuronosyltransferase activity	2.19E-03
41	GO:0019904: protein domain specific binding	2.41E-03
42	GO:0005215: transporter activity	2.68E-03
43	GO:0000155: phosphorelay sensor kinase activity	2.88E-03
44	GO:0016301: kinase activity	2.98E-03
45	GO:0008131: primary amine oxidase activity	3.12E-03
46	GO:0030552: cAMP binding	3.37E-03
47	GO:0030553: cGMP binding	3.37E-03
48	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.56E-03
49	GO:0043424: protein histidine kinase binding	4.17E-03
50	GO:0005216: ion channel activity	4.17E-03
51	GO:0004707: MAP kinase activity	4.44E-03
52	GO:0020037: heme binding	4.59E-03
53	GO:0005524: ATP binding	5.21E-03
54	GO:0003756: protein disulfide isomerase activity	5.32E-03
55	GO:0030551: cyclic nucleotide binding	5.93E-03
56	GO:0005249: voltage-gated potassium channel activity	5.93E-03
57	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.05E-03
58	GO:0030276: clathrin binding	6.24E-03
59	GO:0005507: copper ion binding	6.98E-03
60	GO:0046982: protein heterodimerization activity	7.22E-03
61	GO:0048038: quinone binding	7.22E-03
62	GO:0000156: phosphorelay response regulator activity	7.90E-03
63	GO:0004497: monooxygenase activity	9.13E-03
64	GO:0008375: acetylglucosaminyltransferase activity	1.01E-02
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.01E-02
66	GO:0004683: calmodulin-dependent protein kinase activity	1.05E-02
67	GO:0005506: iron ion binding	1.07E-02
68	GO:0005096: GTPase activator activity	1.17E-02
69	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.18E-02
70	GO:0004722: protein serine/threonine phosphatase activity	1.20E-02
71	GO:0003993: acid phosphatase activity	1.37E-02
72	GO:0051539: 4 iron, 4 sulfur cluster binding	1.46E-02
73	GO:0016746: transferase activity, transferring acyl groups	2.58E-02
74	GO:0019825: oxygen binding	3.42E-02
75	GO:0015297: antiporter activity	3.61E-02
76	GO:0005516: calmodulin binding	3.61E-02
77	GO:0005351: sugar:proton symporter activity	3.67E-02
78	GO:0046872: metal ion binding	4.26E-02
79	GO:0042802: identical protein binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.15E-05
2	GO:0005886: plasma membrane	1.64E-05
3	GO:0005773: vacuole	3.30E-05
4	GO:0009506: plasmodesma	1.53E-04
5	GO:0005783: endoplasmic reticulum	3.61E-04
6	GO:0005794: Golgi apparatus	3.94E-04
7	GO:0005776: autophagosome	5.53E-04
8	GO:0005777: peroxisome	9.79E-04
9	GO:0000786: nucleosome	1.10E-03
10	GO:0010008: endosome membrane	2.39E-03
11	GO:0005765: lysosomal membrane	2.41E-03
12	GO:0005884: actin filament	2.41E-03
13	GO:0005774: vacuolar membrane	4.11E-03
14	GO:0070469: respiratory chain	4.17E-03
15	GO:0031410: cytoplasmic vesicle	4.73E-03
16	GO:0009705: plant-type vacuole membrane	4.76E-03
17	GO:0005618: cell wall	5.20E-03
18	GO:0030136: clathrin-coated vesicle	5.62E-03
19	GO:0005770: late endosome	6.24E-03
20	GO:0000325: plant-type vacuole	1.25E-02
21	GO:0005887: integral component of plasma membrane	1.84E-02
22	GO:0005789: endoplasmic reticulum membrane	1.87E-02
23	GO:0031966: mitochondrial membrane	1.87E-02
24	GO:0022626: cytosolic ribosome	2.30E-02
25	GO:0005829: cytosol	2.37E-02
26	GO:0009706: chloroplast inner membrane	2.53E-02
27	GO:0005802: trans-Golgi network	3.84E-02
28	GO:0016020: membrane	4.17E-02
29	GO:0005768: endosome	4.36E-02