gene detail

Gene description

TAIR ID: AT1G12610

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: -0.49

General responsiveness: -0.65

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of gibberellin biosynthetic process, response to water deprivation, glucosinolate metabolic process, response to heat, transcription, DNA-templated, response to salt stress, regulation of transcription, response to freezing, regulation of unidimensional cell growth, regulation of timing of transition from vegetative to reproductive phase

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
none

Target:
AT1G62990, AT1G50960, AT5G48930, AT1G27440, AT1G71930, AT1G61820, AT4G27435, AT4G34050, AT5G15630, AT2G40890, AT2G37090, AT1G30490, AT5G17490, AT5G62380, AT5G12870, AT5G44030, AT5G60690, AT2G34710, AT3G08500, AT5G60720, AT5G52310, AT1G51680, AT2G42540, AT3G19450

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-4.97	4.22E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-4.72	6.80E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	-3.66	1.36E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.77	6.39E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.65	3.81E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.54	1.55E-02