gene detail

Gene description

TAIR ID: AT5G54680

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -3.33

General responsiveness: -3.71

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G058451

Wheat:

TA.8006.1.S1_A_AT TA.8006.1.S1_X_AT

GO biological process

transcription, DNA-templated, glucosinolate metabolic process, regulation of transcription

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G66600, AT4G36990

Target:
AT4G18780, AT1G27440, AT1G61820, AT5G17420, AT1G62990, AT5G48930, AT5G62380, AT5G13180, AT3G23090, AT1G17950, AT5G60020, AT5G15630, AT2G37090, AT2G40890, AT2G30490, AT1G27380, AT5G12870, AT4G33330, AT3G19450, AT5G44030, AT3G08500, AT5G60720

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition