GO Enrichment Analysis of Co-expressed Genes with
AT5G12250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036265: RNA (guanine-N7)-methylation | 0.00E+00 |
| 2 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 3 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0017038: protein import | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 8 | GO:0008618: 7-methylguanosine metabolic process | 0.00E+00 |
| 9 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 10 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 1.54E-06 |
| 12 | GO:0009904: chloroplast accumulation movement | 9.33E-06 |
| 13 | GO:0009903: chloroplast avoidance movement | 2.05E-05 |
| 14 | GO:0030488: tRNA methylation | 2.05E-05 |
| 15 | GO:0010028: xanthophyll cycle | 7.58E-05 |
| 16 | GO:0010362: negative regulation of anion channel activity by blue light | 7.58E-05 |
| 17 | GO:0015969: guanosine tetraphosphate metabolic process | 7.58E-05 |
| 18 | GO:0009090: homoserine biosynthetic process | 7.58E-05 |
| 19 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 7.58E-05 |
| 20 | GO:0031426: polycistronic mRNA processing | 7.58E-05 |
| 21 | GO:0043489: RNA stabilization | 7.58E-05 |
| 22 | GO:0006659: phosphatidylserine biosynthetic process | 7.58E-05 |
| 23 | GO:0043087: regulation of GTPase activity | 7.58E-05 |
| 24 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.01E-04 |
| 25 | GO:0009416: response to light stimulus | 1.45E-04 |
| 26 | GO:0019253: reductive pentose-phosphate cycle | 1.55E-04 |
| 27 | GO:0010155: regulation of proton transport | 1.81E-04 |
| 28 | GO:0051262: protein tetramerization | 1.81E-04 |
| 29 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.81E-04 |
| 30 | GO:0006096: glycolytic process | 2.58E-04 |
| 31 | GO:2001295: malonyl-CoA biosynthetic process | 3.05E-04 |
| 32 | GO:0030261: chromosome condensation | 3.05E-04 |
| 33 | GO:0000913: preprophase band assembly | 3.05E-04 |
| 34 | GO:0031022: nuclear migration along microfilament | 3.05E-04 |
| 35 | GO:0034051: negative regulation of plant-type hypersensitive response | 3.05E-04 |
| 36 | GO:0080055: low-affinity nitrate transport | 3.05E-04 |
| 37 | GO:0009067: aspartate family amino acid biosynthetic process | 4.41E-04 |
| 38 | GO:0009102: biotin biosynthetic process | 4.41E-04 |
| 39 | GO:1901000: regulation of response to salt stress | 4.41E-04 |
| 40 | GO:0010239: chloroplast mRNA processing | 4.41E-04 |
| 41 | GO:0007018: microtubule-based movement | 4.76E-04 |
| 42 | GO:0009791: post-embryonic development | 5.10E-04 |
| 43 | GO:0010109: regulation of photosynthesis | 5.87E-04 |
| 44 | GO:0006021: inositol biosynthetic process | 5.87E-04 |
| 45 | GO:0006564: L-serine biosynthetic process | 7.44E-04 |
| 46 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 9.07E-04 |
| 47 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.07E-04 |
| 48 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 9.07E-04 |
| 49 | GO:0018298: protein-chromophore linkage | 1.00E-03 |
| 50 | GO:0009854: oxidative photosynthetic carbon pathway | 1.08E-03 |
| 51 | GO:0009088: threonine biosynthetic process | 1.08E-03 |
| 52 | GO:0006811: ion transport | 1.10E-03 |
| 53 | GO:0006400: tRNA modification | 1.26E-03 |
| 54 | GO:0016559: peroxisome fission | 1.46E-03 |
| 55 | GO:0006605: protein targeting | 1.46E-03 |
| 56 | GO:2000070: regulation of response to water deprivation | 1.46E-03 |
| 57 | GO:0098656: anion transmembrane transport | 1.87E-03 |
| 58 | GO:0048507: meristem development | 1.87E-03 |
| 59 | GO:0010206: photosystem II repair | 1.87E-03 |
| 60 | GO:0009638: phototropism | 2.09E-03 |
| 61 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.09E-03 |
| 62 | GO:0009086: methionine biosynthetic process | 2.09E-03 |
| 63 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.32E-03 |
| 64 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.56E-03 |
| 65 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.80E-03 |
| 66 | GO:0045037: protein import into chloroplast stroma | 2.80E-03 |
| 67 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.06E-03 |
| 68 | GO:0009767: photosynthetic electron transport chain | 3.06E-03 |
| 69 | GO:0009785: blue light signaling pathway | 3.06E-03 |
| 70 | GO:0006006: glucose metabolic process | 3.06E-03 |
| 71 | GO:0030036: actin cytoskeleton organization | 3.06E-03 |
| 72 | GO:0006396: RNA processing | 3.12E-03 |
| 73 | GO:0010143: cutin biosynthetic process | 3.32E-03 |
| 74 | GO:0010020: chloroplast fission | 3.32E-03 |
| 75 | GO:0080147: root hair cell development | 4.15E-03 |
| 76 | GO:0006289: nucleotide-excision repair | 4.15E-03 |
| 77 | GO:0008299: isoprenoid biosynthetic process | 4.43E-03 |
| 78 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.43E-03 |
| 79 | GO:0010431: seed maturation | 4.73E-03 |
| 80 | GO:0046686: response to cadmium ion | 5.18E-03 |
| 81 | GO:0007623: circadian rhythm | 5.21E-03 |
| 82 | GO:0010228: vegetative to reproductive phase transition of meristem | 5.46E-03 |
| 83 | GO:0051028: mRNA transport | 5.98E-03 |
| 84 | GO:0009741: response to brassinosteroid | 6.64E-03 |
| 85 | GO:0045489: pectin biosynthetic process | 6.64E-03 |
| 86 | GO:0009646: response to absence of light | 6.99E-03 |
| 87 | GO:0008654: phospholipid biosynthetic process | 7.34E-03 |
| 88 | GO:0010583: response to cyclopentenone | 8.05E-03 |
| 89 | GO:0016032: viral process | 8.05E-03 |
| 90 | GO:0009658: chloroplast organization | 8.06E-03 |
| 91 | GO:0030163: protein catabolic process | 8.42E-03 |
| 92 | GO:0010090: trichome morphogenesis | 8.42E-03 |
| 93 | GO:0000910: cytokinesis | 9.56E-03 |
| 94 | GO:0016126: sterol biosynthetic process | 9.95E-03 |
| 95 | GO:0010027: thylakoid membrane organization | 9.95E-03 |
| 96 | GO:0046777: protein autophosphorylation | 1.07E-02 |
| 97 | GO:0015979: photosynthesis | 1.14E-02 |
| 98 | GO:0000160: phosphorelay signal transduction system | 1.24E-02 |
| 99 | GO:0009813: flavonoid biosynthetic process | 1.24E-02 |
| 100 | GO:0006499: N-terminal protein myristoylation | 1.28E-02 |
| 101 | GO:0009631: cold acclimation | 1.33E-02 |
| 102 | GO:0010119: regulation of stomatal movement | 1.33E-02 |
| 103 | GO:0009853: photorespiration | 1.42E-02 |
| 104 | GO:0045087: innate immune response | 1.42E-02 |
| 105 | GO:0009637: response to blue light | 1.42E-02 |
| 106 | GO:0055114: oxidation-reduction process | 1.51E-02 |
| 107 | GO:0006397: mRNA processing | 1.54E-02 |
| 108 | GO:0006631: fatty acid metabolic process | 1.60E-02 |
| 109 | GO:0009744: response to sucrose | 1.70E-02 |
| 110 | GO:0042546: cell wall biogenesis | 1.75E-02 |
| 111 | GO:0009409: response to cold | 1.80E-02 |
| 112 | GO:0006857: oligopeptide transport | 2.20E-02 |
| 113 | GO:0006633: fatty acid biosynthetic process | 3.72E-02 |
| 114 | GO:0006413: translational initiation | 3.78E-02 |
| 115 | GO:0016310: phosphorylation | 3.78E-02 |
| 116 | GO:0045490: pectin catabolic process | 3.98E-02 |
| 117 | GO:0009451: RNA modification | 4.04E-02 |
| 118 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.31E-02 |
| 119 | GO:0010468: regulation of gene expression | 4.51E-02 |
| 120 | GO:0008380: RNA splicing | 4.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008176: tRNA (guanine-N7-)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 3 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 6 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 7 | GO:0016851: magnesium chelatase activity | 2.91E-06 |
| 8 | GO:0000293: ferric-chelate reductase activity | 1.43E-05 |
| 9 | GO:0005524: ATP binding | 6.88E-05 |
| 10 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 7.58E-05 |
| 11 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 7.58E-05 |
| 12 | GO:0005227: calcium activated cation channel activity | 7.58E-05 |
| 13 | GO:0004618: phosphoglycerate kinase activity | 1.81E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.81E-04 |
| 15 | GO:0004412: homoserine dehydrogenase activity | 1.81E-04 |
| 16 | GO:0004512: inositol-3-phosphate synthase activity | 1.81E-04 |
| 17 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.81E-04 |
| 18 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.81E-04 |
| 19 | GO:0008728: GTP diphosphokinase activity | 1.81E-04 |
| 20 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.05E-04 |
| 21 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 3.05E-04 |
| 22 | GO:0003913: DNA photolyase activity | 3.05E-04 |
| 23 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.05E-04 |
| 24 | GO:0005504: fatty acid binding | 3.05E-04 |
| 25 | GO:0004075: biotin carboxylase activity | 3.05E-04 |
| 26 | GO:0070402: NADPH binding | 3.05E-04 |
| 27 | GO:0005525: GTP binding | 3.79E-04 |
| 28 | GO:0004072: aspartate kinase activity | 4.41E-04 |
| 29 | GO:0000254: C-4 methylsterol oxidase activity | 4.41E-04 |
| 30 | GO:0048027: mRNA 5'-UTR binding | 4.41E-04 |
| 31 | GO:0009882: blue light photoreceptor activity | 4.41E-04 |
| 32 | GO:0070628: proteasome binding | 5.87E-04 |
| 33 | GO:0045430: chalcone isomerase activity | 5.87E-04 |
| 34 | GO:0008017: microtubule binding | 7.02E-04 |
| 35 | GO:0016597: amino acid binding | 7.36E-04 |
| 36 | GO:0003989: acetyl-CoA carboxylase activity | 7.44E-04 |
| 37 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 9.07E-04 |
| 38 | GO:0031593: polyubiquitin binding | 9.07E-04 |
| 39 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 9.07E-04 |
| 40 | GO:0005261: cation channel activity | 1.08E-03 |
| 41 | GO:0009927: histidine phosphotransfer kinase activity | 1.08E-03 |
| 42 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.08E-03 |
| 43 | GO:0009881: photoreceptor activity | 1.26E-03 |
| 44 | GO:0043022: ribosome binding | 1.46E-03 |
| 45 | GO:0008173: RNA methyltransferase activity | 1.66E-03 |
| 46 | GO:0004743: pyruvate kinase activity | 2.09E-03 |
| 47 | GO:0030955: potassium ion binding | 2.09E-03 |
| 48 | GO:0003777: microtubule motor activity | 2.37E-03 |
| 49 | GO:0008559: xenobiotic-transporting ATPase activity | 2.56E-03 |
| 50 | GO:0000155: phosphorelay sensor kinase activity | 3.06E-03 |
| 51 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.06E-03 |
| 52 | GO:0008266: poly(U) RNA binding | 3.32E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.32E-03 |
| 54 | GO:0031409: pigment binding | 3.86E-03 |
| 55 | GO:0043130: ubiquitin binding | 4.15E-03 |
| 56 | GO:0003729: mRNA binding | 4.83E-03 |
| 57 | GO:0030570: pectate lyase activity | 5.34E-03 |
| 58 | GO:0008514: organic anion transmembrane transporter activity | 5.66E-03 |
| 59 | GO:0042802: identical protein binding | 6.62E-03 |
| 60 | GO:0016853: isomerase activity | 6.99E-03 |
| 61 | GO:0010181: FMN binding | 6.99E-03 |
| 62 | GO:0003684: damaged DNA binding | 8.79E-03 |
| 63 | GO:0016791: phosphatase activity | 8.79E-03 |
| 64 | GO:0005200: structural constituent of cytoskeleton | 9.17E-03 |
| 65 | GO:0016168: chlorophyll binding | 1.03E-02 |
| 66 | GO:0008236: serine-type peptidase activity | 1.16E-02 |
| 67 | GO:0005096: GTPase activator activity | 1.24E-02 |
| 68 | GO:0030145: manganese ion binding | 1.33E-02 |
| 69 | GO:0050897: cobalt ion binding | 1.33E-02 |
| 70 | GO:0003993: acid phosphatase activity | 1.46E-02 |
| 71 | GO:0003924: GTPase activity | 1.48E-02 |
| 72 | GO:0050661: NADP binding | 1.55E-02 |
| 73 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.55E-02 |
| 74 | GO:0016491: oxidoreductase activity | 1.74E-02 |
| 75 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.79E-02 |
| 76 | GO:0035091: phosphatidylinositol binding | 1.79E-02 |
| 77 | GO:0051287: NAD binding | 1.94E-02 |
| 78 | GO:0003723: RNA binding | 1.97E-02 |
| 79 | GO:0016887: ATPase activity | 2.30E-02 |
| 80 | GO:0016746: transferase activity, transferring acyl groups | 2.75E-02 |
| 81 | GO:0016301: kinase activity | 2.78E-02 |
| 82 | GO:0016829: lyase activity | 3.34E-02 |
| 83 | GO:0004252: serine-type endopeptidase activity | 3.41E-02 |
| 84 | GO:0008565: protein transporter activity | 3.59E-02 |
| 85 | GO:0003743: translation initiation factor activity | 4.44E-02 |
| 86 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.71E-02 |
| 87 | GO:0005509: calcium ion binding | 4.88E-02 |