co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G12250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
3	GO:0042493: response to drug	0.00E+00
4	GO:0071555: cell wall organization	1.90E-08
5	GO:0010411: xyloglucan metabolic process	2.48E-05
6	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.33E-05
7	GO:0042546: cell wall biogenesis	8.43E-05
8	GO:0060627: regulation of vesicle-mediated transport	1.98E-04
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.98E-04
10	GO:0005980: glycogen catabolic process	1.98E-04
11	GO:0000032: cell wall mannoprotein biosynthetic process	1.98E-04
12	GO:0032025: response to cobalt ion	1.98E-04
13	GO:0080051: cutin transport	1.98E-04
14	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.98E-04
15	GO:0005975: carbohydrate metabolic process	2.90E-04
16	GO:0030244: cellulose biosynthetic process	4.09E-04
17	GO:0010198: synergid death	4.43E-04
18	GO:0015908: fatty acid transport	4.43E-04
19	GO:0043255: regulation of carbohydrate biosynthetic process	4.43E-04
20	GO:0045717: negative regulation of fatty acid biosynthetic process	4.43E-04
21	GO:0010541: acropetal auxin transport	4.43E-04
22	GO:0006633: fatty acid biosynthetic process	5.07E-04
23	GO:0016042: lipid catabolic process	5.70E-04
24	GO:0009825: multidimensional cell growth	6.52E-04
25	GO:0090506: axillary shoot meristem initiation	7.22E-04
26	GO:0033591: response to L-ascorbic acid	7.22E-04
27	GO:1902448: positive regulation of shade avoidance	7.22E-04
28	GO:0046168: glycerol-3-phosphate catabolic process	7.22E-04
29	GO:0010160: formation of animal organ boundary	7.22E-04
30	GO:1901562: response to paraquat	7.22E-04
31	GO:0009833: plant-type primary cell wall biogenesis	7.25E-04
32	GO:0051017: actin filament bundle assembly	8.01E-04
33	GO:0006468: protein phosphorylation	8.42E-04
34	GO:0016998: cell wall macromolecule catabolic process	9.64E-04
35	GO:0051639: actin filament network formation	1.03E-03
36	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.03E-03
37	GO:0006072: glycerol-3-phosphate metabolic process	1.03E-03
38	GO:0009650: UV protection	1.03E-03
39	GO:0010306: rhamnogalacturonan II biosynthetic process	1.03E-03
40	GO:0050482: arachidonic acid secretion	1.03E-03
41	GO:0009413: response to flooding	1.03E-03
42	GO:0009298: GDP-mannose biosynthetic process	1.03E-03
43	GO:0007231: osmosensory signaling pathway	1.03E-03
44	GO:0030245: cellulose catabolic process	1.05E-03
45	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.34E-03
46	GO:0051764: actin crosslink formation	1.37E-03
47	GO:0006085: acetyl-CoA biosynthetic process	1.37E-03
48	GO:0006183: GTP biosynthetic process	1.37E-03
49	GO:0008295: spermidine biosynthetic process	1.37E-03
50	GO:0033500: carbohydrate homeostasis	1.37E-03
51	GO:0009956: radial pattern formation	1.37E-03
52	GO:0010222: stem vascular tissue pattern formation	1.37E-03
53	GO:0000304: response to singlet oxygen	1.74E-03
54	GO:0010583: response to cyclopentenone	2.04E-03
55	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.14E-03
56	GO:0060918: auxin transport	2.14E-03
57	GO:0006796: phosphate-containing compound metabolic process	2.14E-03
58	GO:0010337: regulation of salicylic acid metabolic process	2.14E-03
59	GO:0006014: D-ribose metabolic process	2.14E-03
60	GO:0009737: response to abscisic acid	2.19E-03
61	GO:0010067: procambium histogenesis	2.57E-03
62	GO:2000033: regulation of seed dormancy process	2.57E-03
63	GO:0009612: response to mechanical stimulus	2.57E-03
64	GO:0009942: longitudinal axis specification	2.57E-03
65	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.57E-03
66	GO:0006629: lipid metabolic process	2.82E-03
67	GO:0009645: response to low light intensity stimulus	3.03E-03
68	GO:0007155: cell adhesion	3.51E-03
69	GO:0006644: phospholipid metabolic process	3.51E-03
70	GO:0009832: plant-type cell wall biogenesis	3.77E-03
71	GO:0007389: pattern specification process	4.02E-03
72	GO:0007166: cell surface receptor signaling pathway	4.07E-03
73	GO:0007568: aging	4.15E-03
74	GO:0016051: carbohydrate biosynthetic process	4.54E-03
75	GO:0006754: ATP biosynthetic process	4.54E-03
76	GO:0009414: response to water deprivation	5.40E-03
77	GO:0010162: seed dormancy process	5.67E-03
78	GO:0006032: chitin catabolic process	5.67E-03
79	GO:0006949: syncytium formation	5.67E-03
80	GO:0009826: unidimensional cell growth	5.69E-03
81	GO:0009926: auxin polar transport	5.85E-03
82	GO:0006816: calcium ion transport	6.27E-03
83	GO:0046856: phosphatidylinositol dephosphorylation	6.27E-03
84	GO:0010015: root morphogenesis	6.27E-03
85	GO:0009738: abscisic acid-activated signaling pathway	6.42E-03
86	GO:0008361: regulation of cell size	6.89E-03
87	GO:0006820: anion transport	6.89E-03
88	GO:0016024: CDP-diacylglycerol biosynthetic process	6.89E-03
89	GO:0042538: hyperosmotic salinity response	7.34E-03
90	GO:0010588: cotyledon vascular tissue pattern formation	7.52E-03
91	GO:0010143: cutin biosynthetic process	8.19E-03
92	GO:0009933: meristem structural organization	8.19E-03
93	GO:0010223: secondary shoot formation	8.19E-03
94	GO:0010540: basipetal auxin transport	8.19E-03
95	GO:0009266: response to temperature stimulus	8.19E-03
96	GO:0010167: response to nitrate	8.87E-03
97	GO:0070588: calcium ion transmembrane transport	8.87E-03
98	GO:0010053: root epidermal cell differentiation	8.87E-03
99	GO:0010025: wax biosynthetic process	9.57E-03
100	GO:0006833: water transport	9.57E-03
101	GO:2000377: regulation of reactive oxygen species metabolic process	1.03E-02
102	GO:0043622: cortical microtubule organization	1.10E-02
103	GO:0007017: microtubule-based process	1.10E-02
104	GO:0006869: lipid transport	1.11E-02
105	GO:0031408: oxylipin biosynthetic process	1.18E-02
106	GO:0010431: seed maturation	1.18E-02
107	GO:0031348: negative regulation of defense response	1.26E-02
108	GO:0009408: response to heat	1.29E-02
109	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.34E-02
110	GO:0009294: DNA mediated transformation	1.34E-02
111	GO:0009411: response to UV	1.34E-02
112	GO:0001944: vasculature development	1.34E-02
113	GO:0048364: root development	1.36E-02
114	GO:0048443: stamen development	1.42E-02
115	GO:0006284: base-excision repair	1.42E-02
116	GO:0019722: calcium-mediated signaling	1.42E-02
117	GO:0010089: xylem development	1.42E-02
118	GO:0034220: ion transmembrane transport	1.59E-02
119	GO:0010087: phloem or xylem histogenesis	1.59E-02
120	GO:0009651: response to salt stress	1.66E-02
121	GO:0009958: positive gravitropism	1.67E-02
122	GO:0010305: leaf vascular tissue pattern formation	1.67E-02
123	GO:0010182: sugar mediated signaling pathway	1.67E-02
124	GO:0048868: pollen tube development	1.67E-02
125	GO:0009741: response to brassinosteroid	1.67E-02
126	GO:0019252: starch biosynthetic process	1.85E-02
127	GO:0071554: cell wall organization or biogenesis	1.94E-02
128	GO:0045490: pectin catabolic process	1.95E-02
129	GO:0007165: signal transduction	2.00E-02
130	GO:0009739: response to gibberellin	2.18E-02
131	GO:0010252: auxin homeostasis	2.23E-02
132	GO:0009639: response to red or far red light	2.23E-02
133	GO:0009828: plant-type cell wall loosening	2.23E-02
134	GO:0007267: cell-cell signaling	2.33E-02
135	GO:0051607: defense response to virus	2.42E-02
136	GO:0009416: response to light stimulus	2.66E-02
137	GO:0042128: nitrate assimilation	2.73E-02
138	GO:0015995: chlorophyll biosynthetic process	2.84E-02
139	GO:0016311: dephosphorylation	2.94E-02
140	GO:0016049: cell growth	2.94E-02
141	GO:0000160: phosphorelay signal transduction system	3.16E-02
142	GO:0009834: plant-type secondary cell wall biogenesis	3.27E-02
143	GO:0010218: response to far red light	3.27E-02
144	GO:0048527: lateral root development	3.38E-02
145	GO:0010043: response to zinc ion	3.38E-02
146	GO:0055085: transmembrane transport	3.58E-02
147	GO:0045087: innate immune response	3.61E-02
148	GO:0009637: response to blue light	3.61E-02
149	GO:0006508: proteolysis	3.82E-02
150	GO:0009640: photomorphogenesis	4.32E-02
151	GO:0010114: response to red light	4.32E-02
152	GO:0009644: response to high light intensity	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
2	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
3	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
4	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
5	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.80E-06
6	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.11E-06
7	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.48E-05
8	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.98E-04
9	GO:0008252: nucleotidase activity	1.98E-04
10	GO:0008184: glycogen phosphorylase activity	1.98E-04
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.98E-04
12	GO:0004645: phosphorylase activity	1.98E-04
13	GO:0004476: mannose-6-phosphate isomerase activity	1.98E-04
14	GO:0015245: fatty acid transporter activity	1.98E-04
15	GO:0004766: spermidine synthase activity	4.43E-04
16	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	4.43E-04
17	GO:0003938: IMP dehydrogenase activity	4.43E-04
18	GO:0004565: beta-galactosidase activity	5.18E-04
19	GO:0010329: auxin efflux transmembrane transporter activity	5.18E-04
20	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.22E-04
21	GO:0003878: ATP citrate synthase activity	1.03E-03
22	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.03E-03
23	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.03E-03
24	GO:0001872: (1->3)-beta-D-glucan binding	1.03E-03
25	GO:0030570: pectate lyase activity	1.14E-03
26	GO:0008810: cellulase activity	1.14E-03
27	GO:0016760: cellulose synthase (UDP-forming) activity	1.14E-03
28	GO:0052793: pectin acetylesterase activity	1.37E-03
29	GO:0016836: hydro-lyase activity	1.37E-03
30	GO:0016301: kinase activity	1.49E-03
31	GO:0008381: mechanically-gated ion channel activity	1.74E-03
32	GO:0004623: phospholipase A2 activity	1.74E-03
33	GO:0008725: DNA-3-methyladenine glycosylase activity	1.74E-03
34	GO:0019901: protein kinase binding	1.79E-03
35	GO:0052689: carboxylic ester hydrolase activity	1.82E-03
36	GO:0004629: phospholipase C activity	2.14E-03
37	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.14E-03
38	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.14E-03
39	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.14E-03
40	GO:0051015: actin filament binding	2.18E-03
41	GO:0016759: cellulose synthase activity	2.32E-03
42	GO:0004747: ribokinase activity	2.57E-03
43	GO:0051753: mannan synthase activity	2.57E-03
44	GO:0004435: phosphatidylinositol phospholipase C activity	2.57E-03
45	GO:0004427: inorganic diphosphatase activity	3.03E-03
46	GO:0005524: ATP binding	3.10E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.14E-03
48	GO:0030247: polysaccharide binding	3.24E-03
49	GO:0008865: fructokinase activity	3.51E-03
50	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.51E-03
51	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.54E-03
52	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.54E-03
53	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.65E-03
54	GO:0004674: protein serine/threonine kinase activity	4.98E-03
55	GO:0009672: auxin:proton symporter activity	5.10E-03
56	GO:0015020: glucuronosyltransferase activity	5.67E-03
57	GO:0004568: chitinase activity	5.67E-03
58	GO:0016788: hydrolase activity, acting on ester bonds	6.12E-03
59	GO:0047372: acylglycerol lipase activity	6.27E-03
60	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.89E-03
61	GO:0005262: calcium channel activity	7.52E-03
62	GO:0045735: nutrient reservoir activity	9.33E-03
63	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.57E-03
64	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.57E-03
65	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.57E-03
66	GO:0005528: FK506 binding	1.03E-02
67	GO:0004871: signal transducer activity	1.05E-02
68	GO:0004672: protein kinase activity	1.10E-02
69	GO:0033612: receptor serine/threonine kinase binding	1.18E-02
70	GO:0003924: GTPase activity	1.29E-02
71	GO:0005102: receptor binding	1.50E-02
72	GO:0016829: lyase activity	1.53E-02
73	GO:0001085: RNA polymerase II transcription factor binding	1.67E-02
74	GO:0016787: hydrolase activity	2.10E-02
75	GO:0000156: phosphorelay response regulator activity	2.13E-02
76	GO:0016791: phosphatase activity	2.23E-02
77	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.33E-02
78	GO:0005200: structural constituent of cytoskeleton	2.33E-02
79	GO:0016413: O-acetyltransferase activity	2.42E-02
80	GO:0015250: water channel activity	2.53E-02
81	GO:0008375: acetylglucosaminyltransferase activity	2.73E-02
82	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.27E-02
83	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.38E-02
84	GO:0030145: manganese ion binding	3.38E-02
85	GO:0003993: acid phosphatase activity	3.73E-02
86	GO:0005516: calmodulin binding	4.40E-02
87	GO:0016757: transferase activity, transferring glycosyl groups	4.51E-02
88	GO:0015293: symporter activity	4.70E-02
89	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.82E-02
90	GO:0005525: GTP binding	4.91E-02
91	GO:0051287: NAD binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0005886: plasma membrane	6.10E-11
3	GO:0005618: cell wall	1.53E-09
4	GO:0048046: apoplast	6.88E-09
5	GO:0005576: extracellular region	1.66E-08
6	GO:0009505: plant-type cell wall	5.02E-06
7	GO:0031225: anchored component of membrane	4.04E-05
8	GO:0046658: anchored component of plasma membrane	1.42E-04
9	GO:0009506: plasmodesma	6.81E-04
10	GO:0010330: cellulose synthase complex	7.22E-04
11	GO:0009897: external side of plasma membrane	7.22E-04
12	GO:0016020: membrane	9.41E-04
13	GO:0032432: actin filament bundle	1.03E-03
14	GO:0009346: citrate lyase complex	1.03E-03
15	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.03E-03
16	GO:0010005: cortical microtubule, transverse to long axis	2.57E-03
17	GO:0045298: tubulin complex	4.54E-03
18	GO:0031977: thylakoid lumen	5.39E-03
19	GO:0005884: actin filament	6.27E-03
20	GO:0005578: proteinaceous extracellular matrix	7.52E-03
21	GO:0009534: chloroplast thylakoid	8.99E-03
22	GO:0043234: protein complex	9.57E-03
23	GO:0005875: microtubule associated complex	9.57E-03
24	GO:0031410: cytoplasmic vesicle	1.26E-02
25	GO:0015629: actin cytoskeleton	1.34E-02
26	GO:0009543: chloroplast thylakoid lumen	1.41E-02
27	GO:0005768: endosome	1.67E-02
28	GO:0005887: integral component of plasma membrane	1.90E-02
29	GO:0005667: transcription factor complex	2.73E-02
30	GO:0000151: ubiquitin ligase complex	3.05E-02
31	GO:0005874: microtubule	3.61E-02
32	GO:0005819: spindle	3.84E-02
33	GO:0016021: integral component of membrane	4.25E-02
34	GO:0005794: Golgi apparatus	4.34E-02
35	GO:0005856: cytoskeleton	4.70E-02
36	GO:0005802: trans-Golgi network	4.75E-02