co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G11840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
2	GO:1900367: positive regulation of defense response to insect	0.00E+00
3	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
4	GO:0045730: respiratory burst	0.00E+00
5	GO:0035264: multicellular organism growth	0.00E+00
6	GO:0071327: cellular response to trehalose stimulus	0.00E+00
7	GO:0010200: response to chitin	9.87E-08
8	GO:0006468: protein phosphorylation	1.20E-07
9	GO:0009697: salicylic acid biosynthetic process	6.79E-07
10	GO:0009816: defense response to bacterium, incompatible interaction	2.01E-06
11	GO:0006952: defense response	3.80E-05
12	GO:0045088: regulation of innate immune response	4.69E-05
13	GO:0080142: regulation of salicylic acid biosynthetic process	4.69E-05
14	GO:0060548: negative regulation of cell death	4.69E-05
15	GO:0070588: calcium ion transmembrane transport	5.91E-05
16	GO:0042742: defense response to bacterium	6.45E-05
17	GO:0006979: response to oxidative stress	6.62E-05
18	GO:0010225: response to UV-C	7.43E-05
19	GO:0031348: negative regulation of defense response	1.27E-04
20	GO:0046777: protein autophosphorylation	1.30E-04
21	GO:0046470: phosphatidylcholine metabolic process	1.96E-04
22	GO:0009611: response to wounding	2.18E-04
23	GO:0009617: response to bacterium	2.60E-04
24	GO:0051938: L-glutamate import	2.63E-04
25	GO:0019567: arabinose biosynthetic process	2.63E-04
26	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.63E-04
27	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.63E-04
28	GO:0006643: membrane lipid metabolic process	2.63E-04
29	GO:0007229: integrin-mediated signaling pathway	2.63E-04
30	GO:1901183: positive regulation of camalexin biosynthetic process	2.63E-04
31	GO:0009270: response to humidity	2.63E-04
32	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.63E-04
33	GO:0050691: regulation of defense response to virus by host	2.63E-04
34	GO:0042759: long-chain fatty acid biosynthetic process	2.63E-04
35	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.06E-04
36	GO:0090333: regulation of stomatal closure	3.70E-04
37	GO:0007064: mitotic sister chromatid cohesion	5.12E-04
38	GO:0019725: cellular homeostasis	5.78E-04
39	GO:0043091: L-arginine import	5.78E-04
40	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.78E-04
41	GO:0015802: basic amino acid transport	5.78E-04
42	GO:0010618: aerenchyma formation	5.78E-04
43	GO:0009737: response to abscisic acid	6.08E-04
44	GO:0009738: abscisic acid-activated signaling pathway	8.21E-04
45	GO:0002237: response to molecule of bacterial origin	8.62E-04
46	GO:0009266: response to temperature stimulus	8.62E-04
47	GO:0048281: inflorescence morphogenesis	9.39E-04
48	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.39E-04
49	GO:1900140: regulation of seedling development	9.39E-04
50	GO:0045793: positive regulation of cell size	9.39E-04
51	GO:0010186: positive regulation of cellular defense response	9.39E-04
52	GO:0010150: leaf senescence	1.08E-03
53	GO:0009751: response to salicylic acid	1.20E-03
54	GO:0072334: UDP-galactose transmembrane transport	1.34E-03
55	GO:0010306: rhamnogalacturonan II biosynthetic process	1.34E-03
56	GO:0046513: ceramide biosynthetic process	1.34E-03
57	GO:0046836: glycolipid transport	1.34E-03
58	GO:0048194: Golgi vesicle budding	1.34E-03
59	GO:0009625: response to insect	1.70E-03
60	GO:0010483: pollen tube reception	1.79E-03
61	GO:0009652: thigmotropism	1.79E-03
62	GO:0033358: UDP-L-arabinose biosynthetic process	1.79E-03
63	GO:0010107: potassium ion import	1.79E-03
64	GO:0010508: positive regulation of autophagy	1.79E-03
65	GO:0045227: capsule polysaccharide biosynthetic process	1.79E-03
66	GO:0046345: abscisic acid catabolic process	1.79E-03
67	GO:0006486: protein glycosylation	1.84E-03
68	GO:0042391: regulation of membrane potential	2.16E-03
69	GO:0010118: stomatal movement	2.16E-03
70	GO:0032957: inositol trisphosphate metabolic process	2.29E-03
71	GO:0009164: nucleoside catabolic process	2.29E-03
72	GO:0010117: photoprotection	2.29E-03
73	GO:0009626: plant-type hypersensitive response	2.47E-03
74	GO:0009646: response to absence of light	2.50E-03
75	GO:0009620: response to fungus	2.57E-03
76	GO:0006828: manganese ion transport	2.82E-03
77	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.82E-03
78	GO:0046855: inositol phosphate dephosphorylation	2.82E-03
79	GO:1900425: negative regulation of defense response to bacterium	2.82E-03
80	GO:0002238: response to molecule of fungal origin	2.82E-03
81	GO:0010942: positive regulation of cell death	2.82E-03
82	GO:0010405: arabinogalactan protein metabolic process	2.82E-03
83	GO:0015691: cadmium ion transport	2.82E-03
84	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.07E-03
85	GO:0009742: brassinosteroid mediated signaling pathway	3.10E-03
86	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.40E-03
87	GO:0042372: phylloquinone biosynthetic process	3.40E-03
88	GO:0009612: response to mechanical stimulus	3.40E-03
89	GO:0010555: response to mannitol	3.40E-03
90	GO:0010310: regulation of hydrogen peroxide metabolic process	3.40E-03
91	GO:2000067: regulation of root morphogenesis	3.40E-03
92	GO:0035556: intracellular signal transduction	3.71E-03
93	GO:0071446: cellular response to salicylic acid stimulus	4.00E-03
94	GO:1900056: negative regulation of leaf senescence	4.00E-03
95	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.00E-03
96	GO:0010044: response to aluminum ion	4.00E-03
97	GO:0010161: red light signaling pathway	4.00E-03
98	GO:0098869: cellular oxidant detoxification	4.00E-03
99	GO:0050832: defense response to fungus	4.04E-03
100	GO:0001666: response to hypoxia	4.14E-03
101	GO:0009627: systemic acquired resistance	4.61E-03
102	GO:0030091: protein repair	4.65E-03
103	GO:0006644: phospholipid metabolic process	4.65E-03
104	GO:0007186: G-protein coupled receptor signaling pathway	5.32E-03
105	GO:0030968: endoplasmic reticulum unfolded protein response	5.32E-03
106	GO:0043562: cellular response to nitrogen levels	5.32E-03
107	GO:0009808: lignin metabolic process	5.32E-03
108	GO:0010099: regulation of photomorphogenesis	5.32E-03
109	GO:0009832: plant-type cell wall biogenesis	5.67E-03
110	GO:0009051: pentose-phosphate shunt, oxidative branch	6.03E-03
111	GO:0046916: cellular transition metal ion homeostasis	6.03E-03
112	GO:0010112: regulation of systemic acquired resistance	6.03E-03
113	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.77E-03
114	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.77E-03
115	GO:1900426: positive regulation of defense response to bacterium	6.77E-03
116	GO:0010468: regulation of gene expression	7.24E-03
117	GO:0030001: metal ion transport	7.79E-03
118	GO:0006816: calcium ion transport	8.35E-03
119	GO:0009750: response to fructose	8.35E-03
120	GO:0046856: phosphatidylinositol dephosphorylation	8.35E-03
121	GO:0051707: response to other organism	8.82E-03
122	GO:0009744: response to sucrose	8.82E-03
123	GO:0008361: regulation of cell size	9.17E-03
124	GO:0012501: programmed cell death	9.17E-03
125	GO:0002213: defense response to insect	9.17E-03
126	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.17E-03
127	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.17E-03
128	GO:0006006: glucose metabolic process	1.00E-02
129	GO:0055046: microgametogenesis	1.00E-02
130	GO:0006855: drug transmembrane transport	1.03E-02
131	GO:0031347: regulation of defense response	1.07E-02
132	GO:0007034: vacuolar transport	1.09E-02
133	GO:0010540: basipetal auxin transport	1.09E-02
134	GO:0009969: xyloglucan biosynthetic process	1.18E-02
135	GO:0009225: nucleotide-sugar metabolic process	1.18E-02
136	GO:0090351: seedling development	1.18E-02
137	GO:0009809: lignin biosynthetic process	1.19E-02
138	GO:0007165: signal transduction	1.47E-02
139	GO:0003333: amino acid transmembrane transport	1.58E-02
140	GO:0048511: rhythmic process	1.58E-02
141	GO:0009814: defense response, incompatible interaction	1.68E-02
142	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.68E-02
143	GO:0071456: cellular response to hypoxia	1.68E-02
144	GO:0045892: negative regulation of transcription, DNA-templated	1.70E-02
145	GO:0018105: peptidyl-serine phosphorylation	1.75E-02
146	GO:0006012: galactose metabolic process	1.79E-02
147	GO:0010584: pollen exine formation	1.90E-02
148	GO:0019722: calcium-mediated signaling	1.90E-02
149	GO:0042147: retrograde transport, endosome to Golgi	2.01E-02
150	GO:0032259: methylation	2.06E-02
151	GO:0016042: lipid catabolic process	2.09E-02
152	GO:0042631: cellular response to water deprivation	2.13E-02
153	GO:0006629: lipid metabolic process	2.17E-02
154	GO:0010197: polar nucleus fusion	2.24E-02
155	GO:0009845: seed germination	2.31E-02
156	GO:0009749: response to glucose	2.48E-02
157	GO:0008654: phospholipid biosynthetic process	2.48E-02
158	GO:0002229: defense response to oomycetes	2.61E-02
159	GO:0010193: response to ozone	2.61E-02
160	GO:0000302: response to reactive oxygen species	2.61E-02
161	GO:0006891: intra-Golgi vesicle-mediated transport	2.61E-02
162	GO:0016032: viral process	2.73E-02
163	GO:0009630: gravitropism	2.73E-02
164	GO:0030163: protein catabolic process	2.86E-02
165	GO:0006904: vesicle docking involved in exocytosis	3.12E-02
166	GO:0006470: protein dephosphorylation	3.36E-02
167	GO:0007166: cell surface receptor signaling pathway	3.36E-02
168	GO:0009911: positive regulation of flower development	3.39E-02
169	GO:0009414: response to water deprivation	3.47E-02
170	GO:0048573: photoperiodism, flowering	3.80E-02
171	GO:0008219: cell death	4.09E-02
172	GO:0010311: lateral root formation	4.24E-02
173	GO:0048527: lateral root development	4.53E-02
174	GO:0010119: regulation of stomatal movement	4.53E-02
175	GO:0009910: negative regulation of flower development	4.53E-02
176	GO:0045087: innate immune response	4.84E-02
177	GO:0006970: response to osmotic stress	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0004674: protein serine/threonine kinase activity	1.53E-07
3	GO:0016301: kinase activity	4.34E-07
4	GO:0005524: ATP binding	2.08E-06
5	GO:0005509: calcium ion binding	8.00E-06
6	GO:0005516: calmodulin binding	2.30E-05
7	GO:0005388: calcium-transporting ATPase activity	4.04E-05
8	GO:0004012: phospholipid-translocating ATPase activity	1.49E-04
9	GO:0015085: calcium ion transmembrane transporter activity	2.63E-04
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.63E-04
11	GO:0008909: isochorismate synthase activity	2.63E-04
12	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.63E-04
13	GO:0004630: phospholipase D activity	3.06E-04
14	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.06E-04
15	GO:0008171: O-methyltransferase activity	5.12E-04
16	GO:0022821: potassium ion antiporter activity	5.78E-04
17	GO:0001671: ATPase activator activity	5.78E-04
18	GO:0050291: sphingosine N-acyltransferase activity	5.78E-04
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.67E-04
20	GO:0042409: caffeoyl-CoA O-methyltransferase activity	9.39E-04
21	GO:0031683: G-protein beta/gamma-subunit complex binding	9.39E-04
22	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	9.39E-04
23	GO:0016595: glutamate binding	9.39E-04
24	GO:0001664: G-protein coupled receptor binding	9.39E-04
25	GO:0030553: cGMP binding	9.62E-04
26	GO:0004190: aspartic-type endopeptidase activity	9.62E-04
27	GO:0030552: cAMP binding	9.62E-04
28	GO:0043424: protein histidine kinase binding	1.30E-03
29	GO:0005216: ion channel activity	1.30E-03
30	GO:0017089: glycolipid transporter activity	1.34E-03
31	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.34E-03
32	GO:0015181: arginine transmembrane transporter activity	1.34E-03
33	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	1.34E-03
34	GO:0015189: L-lysine transmembrane transporter activity	1.34E-03
35	GO:0015369: calcium:proton antiporter activity	1.79E-03
36	GO:0005313: L-glutamate transmembrane transporter activity	1.79E-03
37	GO:0042277: peptide binding	1.79E-03
38	GO:0015368: calcium:cation antiporter activity	1.79E-03
39	GO:0050373: UDP-arabinose 4-epimerase activity	1.79E-03
40	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.79E-03
41	GO:0051861: glycolipid binding	1.79E-03
42	GO:0030551: cyclic nucleotide binding	2.16E-03
43	GO:0005249: voltage-gated potassium channel activity	2.16E-03
44	GO:0010294: abscisic acid glucosyltransferase activity	2.29E-03
45	GO:0005459: UDP-galactose transmembrane transporter activity	2.29E-03
46	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.29E-03
47	GO:0047631: ADP-ribose diphosphatase activity	2.29E-03
48	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.29E-03
49	GO:0004672: protein kinase activity	2.41E-03
50	GO:0043531: ADP binding	2.42E-03
51	GO:0019901: protein kinase binding	2.68E-03
52	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.82E-03
53	GO:0000210: NAD+ diphosphatase activity	2.82E-03
54	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.82E-03
55	GO:0035252: UDP-xylosyltransferase activity	2.82E-03
56	GO:0004605: phosphatidate cytidylyltransferase activity	2.82E-03
57	GO:0008195: phosphatidate phosphatase activity	3.40E-03
58	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.40E-03
59	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.40E-03
60	GO:0005261: cation channel activity	3.40E-03
61	GO:0003978: UDP-glucose 4-epimerase activity	3.40E-03
62	GO:0019900: kinase binding	3.40E-03
63	GO:0004143: diacylglycerol kinase activity	4.00E-03
64	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	4.00E-03
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.61E-03
66	GO:0005544: calcium-dependent phospholipid binding	4.65E-03
67	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.65E-03
68	GO:0004806: triglyceride lipase activity	4.87E-03
69	GO:0004683: calmodulin-dependent protein kinase activity	4.87E-03
70	GO:0003951: NAD+ kinase activity	5.32E-03
71	GO:0015238: drug transmembrane transporter activity	5.67E-03
72	GO:0008417: fucosyltransferase activity	6.03E-03
73	GO:0015174: basic amino acid transmembrane transporter activity	6.77E-03
74	GO:0004713: protein tyrosine kinase activity	7.54E-03
75	GO:0008378: galactosyltransferase activity	9.17E-03
76	GO:0004521: endoribonuclease activity	9.17E-03
77	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	9.17E-03
78	GO:0015095: magnesium ion transmembrane transporter activity	1.00E-02
79	GO:0016298: lipase activity	1.23E-02
80	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.46E-02
81	GO:0051087: chaperone binding	1.48E-02
82	GO:0004707: MAP kinase activity	1.58E-02
83	GO:0033612: receptor serine/threonine kinase binding	1.58E-02
84	GO:0046872: metal ion binding	1.78E-02
85	GO:0030246: carbohydrate binding	1.97E-02
86	GO:0004842: ubiquitin-protein transferase activity	2.01E-02
87	GO:0010181: FMN binding	2.36E-02
88	GO:0004197: cysteine-type endopeptidase activity	2.73E-02
89	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.74E-02
90	GO:0015297: antiporter activity	2.81E-02
91	GO:0004721: phosphoprotein phosphatase activity	3.80E-02
92	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.95E-02
93	GO:0004222: metalloendopeptidase activity	4.38E-02
94	GO:0000287: magnesium ion binding	4.45E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.53E-02
96	GO:0003682: chromatin binding	4.79E-02
97	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.78E-12
2	GO:0016021: integral component of membrane	1.82E-04
3	GO:0005887: integral component of plasma membrane	5.12E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.39E-04
5	GO:0030176: integral component of endoplasmic reticulum membrane	9.62E-04
6	GO:0070062: extracellular exosome	1.34E-03
7	GO:0030173: integral component of Golgi membrane	3.40E-03
8	GO:0032580: Golgi cisterna membrane	3.47E-03
9	GO:0031012: extracellular matrix	1.00E-02
10	GO:0005769: early endosome	1.28E-02
11	GO:0043231: intracellular membrane-bounded organelle	2.45E-02
12	GO:0000145: exocyst	2.73E-02
13	GO:0009705: plant-type vacuole membrane	2.94E-02
14	GO:0005737: cytoplasm	3.77E-02
15	GO:0000151: ubiquitin ligase complex	4.09E-02