GO Enrichment Analysis of Co-expressed Genes with
AT3G11840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 2 | GO:0009992: cellular water homeostasis | 0.00E+00 |
| 3 | GO:0009312: oligosaccharide biosynthetic process | 0.00E+00 |
| 4 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 5 | GO:0006468: protein phosphorylation | 2.33E-09 |
| 6 | GO:0031348: negative regulation of defense response | 3.02E-07 |
| 7 | GO:0006517: protein deglycosylation | 2.22E-06 |
| 8 | GO:0009627: systemic acquired resistance | 3.70E-06 |
| 9 | GO:0008219: cell death | 5.19E-06 |
| 10 | GO:0009617: response to bacterium | 1.64E-05 |
| 11 | GO:0048544: recognition of pollen | 3.92E-05 |
| 12 | GO:0009620: response to fungus | 4.50E-05 |
| 13 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 7.89E-05 |
| 14 | GO:0009816: defense response to bacterium, incompatible interaction | 9.36E-05 |
| 15 | GO:0016337: single organismal cell-cell adhesion | 1.06E-04 |
| 16 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.06E-04 |
| 17 | GO:0071366: cellular response to indolebutyric acid stimulus | 1.06E-04 |
| 18 | GO:0006643: membrane lipid metabolic process | 1.06E-04 |
| 19 | GO:0002143: tRNA wobble position uridine thiolation | 1.06E-04 |
| 20 | GO:0009751: response to salicylic acid | 1.11E-04 |
| 21 | GO:0009817: defense response to fungus, incompatible interaction | 1.27E-04 |
| 22 | GO:0006470: protein dephosphorylation | 1.82E-04 |
| 23 | GO:0080185: effector dependent induction by symbiont of host immune response | 2.48E-04 |
| 24 | GO:0006024: glycosaminoglycan biosynthetic process | 2.48E-04 |
| 25 | GO:0052541: plant-type cell wall cellulose metabolic process | 2.48E-04 |
| 26 | GO:0006212: uracil catabolic process | 2.48E-04 |
| 27 | GO:0019483: beta-alanine biosynthetic process | 2.48E-04 |
| 28 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.48E-04 |
| 29 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 2.48E-04 |
| 30 | GO:0042742: defense response to bacterium | 2.68E-04 |
| 31 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 4.12E-04 |
| 32 | GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity | 4.12E-04 |
| 33 | GO:0010498: proteasomal protein catabolic process | 4.12E-04 |
| 34 | GO:0042344: indole glucosinolate catabolic process | 4.12E-04 |
| 35 | GO:0042780: tRNA 3'-end processing | 4.12E-04 |
| 36 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.63E-04 |
| 37 | GO:0009311: oligosaccharide metabolic process | 5.92E-04 |
| 38 | GO:0002239: response to oomycetes | 5.92E-04 |
| 39 | GO:0010104: regulation of ethylene-activated signaling pathway | 5.92E-04 |
| 40 | GO:0072583: clathrin-dependent endocytosis | 5.92E-04 |
| 41 | GO:0006516: glycoprotein catabolic process | 5.92E-04 |
| 42 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 5.92E-04 |
| 43 | GO:0000187: activation of MAPK activity | 5.92E-04 |
| 44 | GO:0048194: Golgi vesicle budding | 5.92E-04 |
| 45 | GO:0060548: negative regulation of cell death | 7.86E-04 |
| 46 | GO:2000038: regulation of stomatal complex development | 7.86E-04 |
| 47 | GO:0010188: response to microbial phytotoxin | 7.86E-04 |
| 48 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 7.86E-04 |
| 49 | GO:0002229: defense response to oomycetes | 8.40E-04 |
| 50 | GO:0006665: sphingolipid metabolic process | 9.92E-04 |
| 51 | GO:0006090: pyruvate metabolic process | 9.92E-04 |
| 52 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 9.92E-04 |
| 53 | GO:0015691: cadmium ion transport | 1.21E-03 |
| 54 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 1.21E-03 |
| 55 | GO:0043966: histone H3 acetylation | 1.45E-03 |
| 56 | GO:2000037: regulation of stomatal complex patterning | 1.45E-03 |
| 57 | GO:0009813: flavonoid biosynthetic process | 1.62E-03 |
| 58 | GO:0046470: phosphatidylcholine metabolic process | 1.70E-03 |
| 59 | GO:1900056: negative regulation of leaf senescence | 1.70E-03 |
| 60 | GO:0010044: response to aluminum ion | 1.70E-03 |
| 61 | GO:0030162: regulation of proteolysis | 1.97E-03 |
| 62 | GO:0006491: N-glycan processing | 1.97E-03 |
| 63 | GO:0006002: fructose 6-phosphate metabolic process | 2.24E-03 |
| 64 | GO:0071482: cellular response to light stimulus | 2.24E-03 |
| 65 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.24E-03 |
| 66 | GO:0043562: cellular response to nitrogen levels | 2.24E-03 |
| 67 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.53E-03 |
| 68 | GO:0010112: regulation of systemic acquired resistance | 2.53E-03 |
| 69 | GO:0006952: defense response | 2.61E-03 |
| 70 | GO:0009086: methionine biosynthetic process | 2.84E-03 |
| 71 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 2.84E-03 |
| 72 | GO:0046777: protein autophosphorylation | 2.86E-03 |
| 73 | GO:0031347: regulation of defense response | 3.01E-03 |
| 74 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.01E-03 |
| 75 | GO:0006995: cellular response to nitrogen starvation | 3.15E-03 |
| 76 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.15E-03 |
| 77 | GO:0006486: protein glycosylation | 3.35E-03 |
| 78 | GO:0009682: induced systemic resistance | 3.47E-03 |
| 79 | GO:0052544: defense response by callose deposition in cell wall | 3.47E-03 |
| 80 | GO:0019684: photosynthesis, light reaction | 3.47E-03 |
| 81 | GO:0006352: DNA-templated transcription, initiation | 3.47E-03 |
| 82 | GO:0006807: nitrogen compound metabolic process | 4.16E-03 |
| 83 | GO:0006108: malate metabolic process | 4.16E-03 |
| 84 | GO:0010229: inflorescence development | 4.16E-03 |
| 85 | GO:0055046: microgametogenesis | 4.16E-03 |
| 86 | GO:0009626: plant-type hypersensitive response | 4.21E-03 |
| 87 | GO:0007165: signal transduction | 4.44E-03 |
| 88 | GO:0080188: RNA-directed DNA methylation | 4.88E-03 |
| 89 | GO:0010053: root epidermal cell differentiation | 4.88E-03 |
| 90 | GO:0051260: protein homooligomerization | 6.46E-03 |
| 91 | GO:0009814: defense response, incompatible interaction | 6.87E-03 |
| 92 | GO:0009625: response to insect | 7.30E-03 |
| 93 | GO:0010227: floral organ abscission | 7.30E-03 |
| 94 | GO:0009561: megagametogenesis | 7.74E-03 |
| 95 | GO:0009738: abscisic acid-activated signaling pathway | 8.55E-03 |
| 96 | GO:0042391: regulation of membrane potential | 8.64E-03 |
| 97 | GO:0000413: protein peptidyl-prolyl isomerization | 8.64E-03 |
| 98 | GO:0010087: phloem or xylem histogenesis | 8.64E-03 |
| 99 | GO:0008360: regulation of cell shape | 9.10E-03 |
| 100 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 9.17E-03 |
| 101 | GO:0007166: cell surface receptor signaling pathway | 9.37E-03 |
| 102 | GO:0010183: pollen tube guidance | 1.01E-02 |
| 103 | GO:0010193: response to ozone | 1.06E-02 |
| 104 | GO:0000302: response to reactive oxygen species | 1.06E-02 |
| 105 | GO:0030163: protein catabolic process | 1.16E-02 |
| 106 | GO:0001666: response to hypoxia | 1.37E-02 |
| 107 | GO:0009607: response to biotic stimulus | 1.42E-02 |
| 108 | GO:0048366: leaf development | 1.50E-02 |
| 109 | GO:0006950: response to stress | 1.54E-02 |
| 110 | GO:0016049: cell growth | 1.59E-02 |
| 111 | GO:0006499: N-terminal protein myristoylation | 1.77E-02 |
| 112 | GO:0009867: jasmonic acid mediated signaling pathway | 1.95E-02 |
| 113 | GO:0006099: tricarboxylic acid cycle | 2.02E-02 |
| 114 | GO:0000209: protein polyubiquitination | 2.41E-02 |
| 115 | GO:0006855: drug transmembrane transport | 2.61E-02 |
| 116 | GO:0000165: MAPK cascade | 2.68E-02 |
| 117 | GO:0009736: cytokinin-activated signaling pathway | 2.89E-02 |
| 118 | GO:0006096: glycolytic process | 3.26E-02 |
| 119 | GO:0016569: covalent chromatin modification | 3.56E-02 |
| 120 | GO:0042545: cell wall modification | 3.64E-02 |
| 121 | GO:0018105: peptidyl-serine phosphorylation | 3.80E-02 |
| 122 | GO:0051726: regulation of cell cycle | 3.88E-02 |
| 123 | GO:0009742: brassinosteroid mediated signaling pathway | 3.88E-02 |
| 124 | GO:0045893: positive regulation of transcription, DNA-templated | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 2 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 3 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
| 4 | GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 5 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 6 | GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity | 0.00E+00 |
| 7 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
| 8 | GO:0016301: kinase activity | 1.31E-09 |
| 9 | GO:0005524: ATP binding | 5.40E-09 |
| 10 | GO:0004674: protein serine/threonine kinase activity | 8.03E-07 |
| 11 | GO:0004012: phospholipid-translocating ATPase activity | 3.53E-05 |
| 12 | GO:0032050: clathrin heavy chain binding | 1.06E-04 |
| 13 | GO:1901149: salicylic acid binding | 1.06E-04 |
| 14 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 1.06E-04 |
| 15 | GO:0001102: RNA polymerase II activating transcription factor binding | 1.06E-04 |
| 16 | GO:0030246: carbohydrate binding | 1.06E-04 |
| 17 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 1.06E-04 |
| 18 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.06E-04 |
| 19 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.19E-04 |
| 20 | GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters | 2.48E-04 |
| 21 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 4.12E-04 |
| 22 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 4.12E-04 |
| 23 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 4.12E-04 |
| 24 | GO:0033612: receptor serine/threonine kinase binding | 4.23E-04 |
| 25 | GO:0015086: cadmium ion transmembrane transporter activity | 5.92E-04 |
| 26 | GO:0004792: thiosulfate sulfurtransferase activity | 5.92E-04 |
| 27 | GO:0004672: protein kinase activity | 5.94E-04 |
| 28 | GO:0005516: calmodulin binding | 7.34E-04 |
| 29 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 7.86E-04 |
| 30 | GO:0019199: transmembrane receptor protein kinase activity | 7.86E-04 |
| 31 | GO:0004470: malic enzyme activity | 7.86E-04 |
| 32 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 7.86E-04 |
| 33 | GO:0015204: urea transmembrane transporter activity | 7.86E-04 |
| 34 | GO:0045431: flavonol synthase activity | 9.92E-04 |
| 35 | GO:0008641: small protein activating enzyme activity | 9.92E-04 |
| 36 | GO:0008948: oxaloacetate decarboxylase activity | 9.92E-04 |
| 37 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 9.92E-04 |
| 38 | GO:0046872: metal ion binding | 9.96E-04 |
| 39 | GO:0005261: cation channel activity | 1.45E-03 |
| 40 | GO:0003872: 6-phosphofructokinase activity | 1.70E-03 |
| 41 | GO:0046982: protein heterodimerization activity | 1.96E-03 |
| 42 | GO:0004708: MAP kinase kinase activity | 1.97E-03 |
| 43 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.97E-03 |
| 44 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.24E-03 |
| 45 | GO:0004630: phospholipase D activity | 2.24E-03 |
| 46 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 2.24E-03 |
| 47 | GO:0008417: fucosyltransferase activity | 2.53E-03 |
| 48 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.53E-03 |
| 49 | GO:0005198: structural molecule activity | 2.80E-03 |
| 50 | GO:0004722: protein serine/threonine phosphatase activity | 3.71E-03 |
| 51 | GO:0031625: ubiquitin protein ligase binding | 3.71E-03 |
| 52 | GO:0030553: cGMP binding | 4.88E-03 |
| 53 | GO:0017025: TBP-class protein binding | 4.88E-03 |
| 54 | GO:0004190: aspartic-type endopeptidase activity | 4.88E-03 |
| 55 | GO:0030552: cAMP binding | 4.88E-03 |
| 56 | GO:0004725: protein tyrosine phosphatase activity | 5.26E-03 |
| 57 | GO:0051536: iron-sulfur cluster binding | 5.65E-03 |
| 58 | GO:0005216: ion channel activity | 6.05E-03 |
| 59 | GO:0035251: UDP-glucosyltransferase activity | 6.46E-03 |
| 60 | GO:0016887: ATPase activity | 7.50E-03 |
| 61 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 7.64E-03 |
| 62 | GO:0005515: protein binding | 8.62E-03 |
| 63 | GO:0030551: cyclic nucleotide binding | 8.64E-03 |
| 64 | GO:0005249: voltage-gated potassium channel activity | 8.64E-03 |
| 65 | GO:0004402: histone acetyltransferase activity | 8.64E-03 |
| 66 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.04E-02 |
| 67 | GO:0000287: magnesium ion binding | 1.25E-02 |
| 68 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.26E-02 |
| 69 | GO:0008375: acetylglucosaminyltransferase activity | 1.48E-02 |
| 70 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.48E-02 |
| 71 | GO:0004806: triglyceride lipase activity | 1.54E-02 |
| 72 | GO:0030247: polysaccharide binding | 1.54E-02 |
| 73 | GO:0004683: calmodulin-dependent protein kinase activity | 1.54E-02 |
| 74 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.54E-02 |
| 75 | GO:0005096: GTPase activator activity | 1.71E-02 |
| 76 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.95E-02 |
| 77 | GO:0005509: calcium ion binding | 1.97E-02 |
| 78 | GO:0015293: symporter activity | 2.54E-02 |
| 79 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.61E-02 |
| 80 | GO:0051287: NAD binding | 2.68E-02 |
| 81 | GO:0016298: lipase activity | 2.97E-02 |
| 82 | GO:0015171: amino acid transmembrane transporter activity | 3.11E-02 |
| 83 | GO:0045330: aspartyl esterase activity | 3.11E-02 |
| 84 | GO:0030599: pectinesterase activity | 3.56E-02 |
| 85 | GO:0016746: transferase activity, transferring acyl groups | 3.80E-02 |
| 86 | GO:0004386: helicase activity | 3.96E-02 |
| 87 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 1.89E-07 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 1.06E-04 |
| 3 | GO:0000124: SAGA complex | 2.48E-04 |
| 4 | GO:0016021: integral component of membrane | 4.67E-04 |
| 5 | GO:0005945: 6-phosphofructokinase complex | 9.92E-04 |
| 6 | GO:0005669: transcription factor TFIID complex | 1.97E-03 |
| 7 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.24E-03 |
| 8 | GO:0030125: clathrin vesicle coat | 3.15E-03 |
| 9 | GO:0005737: cytoplasm | 4.85E-03 |
| 10 | GO:0005795: Golgi stack | 4.88E-03 |
| 11 | GO:0043234: protein complex | 5.26E-03 |
| 12 | GO:0009506: plasmodesma | 6.40E-03 |
| 13 | GO:0009504: cell plate | 1.01E-02 |
| 14 | GO:0071944: cell periphery | 1.16E-02 |
| 15 | GO:0032580: Golgi cisterna membrane | 1.21E-02 |
| 16 | GO:0005802: trans-Golgi network | 1.62E-02 |
| 17 | GO:0019005: SCF ubiquitin ligase complex | 1.65E-02 |
| 18 | GO:0000786: nucleosome | 1.89E-02 |
| 19 | GO:0005768: endosome | 1.91E-02 |
| 20 | GO:0090406: pollen tube | 2.34E-02 |
| 21 | GO:0005887: integral component of plasma membrane | 3.17E-02 |
| 22 | GO:0010008: endosome membrane | 3.33E-02 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 4.36E-02 |
| 24 | GO:0005623: cell | 4.45E-02 |