Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048263: determination of dorsal identity0.00E+00
2GO:0060966: regulation of gene silencing by RNA0.00E+00
3GO:0070829: heterochromatin maintenance0.00E+00
4GO:0071360: cellular response to exogenous dsRNA0.00E+00
5GO:1900370: positive regulation of RNA interference0.00E+00
6GO:0035563: positive regulation of chromatin binding0.00E+00
7GO:1900368: regulation of RNA interference9.19E-07
8GO:1900111: positive regulation of histone H3-K9 dimethylation2.63E-06
9GO:0010424: DNA methylation on cytosine within a CG sequence2.63E-06
10GO:0010069: zygote asymmetric cytokinesis in embryo sac2.63E-06
11GO:0032776: DNA methylation on cytosine5.06E-06
12GO:0060968: regulation of gene silencing5.06E-06
13GO:0060964: regulation of gene silencing by miRNA8.12E-06
14GO:0009855: determination of bilateral symmetry8.12E-06
15GO:0010014: meristem initiation2.57E-05
16GO:0080060: integument development2.57E-05
17GO:0070413: trehalose metabolism in response to stress3.71E-05
18GO:0006349: regulation of gene expression by genetic imprinting5.67E-05
19GO:0030422: production of siRNA involved in RNA interference6.40E-05
20GO:0010216: maintenance of DNA methylation7.14E-05
21GO:0010152: pollen maturation7.90E-05
22GO:0010075: regulation of meristem growth8.72E-05
23GO:0009887: animal organ morphogenesis9.53E-05
24GO:0080188: RNA-directed DNA methylation1.04E-04
25GO:0005992: trehalose biosynthetic process1.21E-04
26GO:0010073: meristem maintenance1.30E-04
27GO:0006306: DNA methylation1.40E-04
28GO:0009294: DNA mediated transformation1.59E-04
29GO:0048443: stamen development1.68E-04
30GO:0010087: phloem or xylem histogenesis1.88E-04
31GO:0010311: lateral root formation3.65E-04
32GO:0009910: negative regulation of flower development3.89E-04
33GO:0009965: leaf morphogenesis5.26E-04
34GO:0016569: covalent chromatin modification7.14E-04
35GO:0016036: cellular response to phosphate starvation1.01E-03
36GO:0007049: cell cycle1.50E-03
37GO:0009873: ethylene-activated signaling pathway2.48E-03
38GO:0009734: auxin-activated signaling pathway2.63E-03
39GO:0006511: ubiquitin-dependent protein catabolic process3.78E-03
40GO:0030154: cell differentiation5.27E-03
41GO:0009733: response to auxin5.38E-03
42GO:0050832: defense response to fungus1.06E-02
43GO:0016567: protein ubiquitination1.08E-02
44GO:0006952: defense response1.65E-02
RankGO TermAdjusted P value
1GO:0038198: auxin receptor activity0.00E+00
2GO:0000822: inositol hexakisphosphate binding2.63E-06
3GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity8.12E-06
4GO:0010011: auxin binding1.18E-05
5GO:0003886: DNA (cytosine-5-)-methyltransferase activity2.57E-05
6GO:0004805: trehalose-phosphatase activity6.40E-05
7GO:0004386: helicase activity7.86E-04
8GO:0008168: methyltransferase activity1.36E-03
9GO:0003682: chromatin binding1.45E-03
10GO:0003677: DNA binding1.95E-03
11GO:0008289: lipid binding2.61E-03
12GO:0005515: protein binding3.97E-03
13GO:0004842: ubiquitin-protein transferase activity6.21E-03
14GO:0016757: transferase activity, transferring glycosyl groups1.17E-02
15GO:0003676: nucleic acid binding1.34E-02
RankGO TermAdjusted P value
1GO:0090577: RNA polymerase IV transcription factor complex0.00E+00
2GO:0031618: nuclear pericentric heterochromatin0.00E+00
3GO:0000419: DNA-directed RNA polymerase V complex1.12E-04
4GO:0000151: ubiquitin ligase complex3.53E-04
5GO:0019005: SCF ubiquitin ligase complex3.53E-04
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Gene type



Gene DE type