Gene: AT5G25460
     

Gene description


TAIR ID: AT5G25460

Short description: Protein of unknown function, DUF642

Pathogen responsiveness: 1.46

General responsiveness: 0.12

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.86713.1.S1_AT  


GO biological process


response to karrikin, root morphogenesis


GO cellular component


extracellular region, plant-type cell wall, plasmodesma


GO molecular function


molecular_function


Protein domain


PfamPF04862, Protein of unknown function (DUF642)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G20180, AT5G41315, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


38 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.833.38E-06
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-1.593.88E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d2.522.69E-04
GSE17464Laer, controlLaer, PstDC3000 12 h2.377.08E-04
GSE17464Laer, controlLaer, Flg22 2 h-2.211.13E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.951.96E-05
GSE17464Penta, controlPenta, PstDC3000 12 h4.196.56E-09
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-3.163.46E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-3.765.05E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-3.222.58E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.462.87E-14
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.412.26E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.099.37E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.673.65E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.991.40E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-3.692.47E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-2.589.77E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-5.038.42E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.832.68E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-4.101.68E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.461.53E-06
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.861.65E-05
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.922.68E-07
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.151.60E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.561.33E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.494.88E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.696.46E-07
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.693.39E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.531.69E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.617.62E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.721.44E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.757.00E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.411.83E-03
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.751.96E-05
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.523.36E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.828.51E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-4.444.62E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-3.342.46E-07






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