GO Enrichment Analysis of Co-expressed Genes with
AT5G25460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042493: response to drug | 0.00E+00 |
| 2 | GO:0046620: regulation of organ growth | 7.19E-10 |
| 3 | GO:0009926: auxin polar transport | 9.03E-08 |
| 4 | GO:0051513: regulation of monopolar cell growth | 2.38E-06 |
| 5 | GO:0009733: response to auxin | 9.32E-06 |
| 6 | GO:0045490: pectin catabolic process | 4.78E-05 |
| 7 | GO:0009734: auxin-activated signaling pathway | 6.42E-05 |
| 8 | GO:0010207: photosystem II assembly | 1.31E-04 |
| 9 | GO:0009664: plant-type cell wall organization | 1.50E-04 |
| 10 | GO:0001736: establishment of planar polarity | 1.62E-04 |
| 11 | GO:0010541: acropetal auxin transport | 1.62E-04 |
| 12 | GO:0045493: xylan catabolic process | 2.75E-04 |
| 13 | GO:0010160: formation of animal organ boundary | 2.75E-04 |
| 14 | GO:0015840: urea transport | 2.75E-04 |
| 15 | GO:0080055: low-affinity nitrate transport | 2.75E-04 |
| 16 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.77E-04 |
| 17 | GO:0009958: positive gravitropism | 3.82E-04 |
| 18 | GO:0080170: hydrogen peroxide transmembrane transport | 3.98E-04 |
| 19 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.98E-04 |
| 20 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.98E-04 |
| 21 | GO:0009650: UV protection | 3.98E-04 |
| 22 | GO:0030104: water homeostasis | 5.32E-04 |
| 23 | GO:0009828: plant-type cell wall loosening | 5.67E-04 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 7.86E-04 |
| 25 | GO:0042549: photosystem II stabilization | 8.23E-04 |
| 26 | GO:0060918: auxin transport | 8.23E-04 |
| 27 | GO:1900056: negative regulation of leaf senescence | 1.14E-03 |
| 28 | GO:0080167: response to karrikin | 1.22E-03 |
| 29 | GO:0030091: protein repair | 1.32E-03 |
| 30 | GO:0009245: lipid A biosynthetic process | 1.69E-03 |
| 31 | GO:0010206: photosystem II repair | 1.69E-03 |
| 32 | GO:0048829: root cap development | 2.10E-03 |
| 33 | GO:0006949: syncytium formation | 2.10E-03 |
| 34 | GO:0048765: root hair cell differentiation | 2.31E-03 |
| 35 | GO:0009750: response to fructose | 2.31E-03 |
| 36 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.31E-03 |
| 37 | GO:0009740: gibberellic acid mediated signaling pathway | 2.46E-03 |
| 38 | GO:0008361: regulation of cell size | 2.53E-03 |
| 39 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.53E-03 |
| 40 | GO:0009624: response to nematode | 2.61E-03 |
| 41 | GO:0010540: basipetal auxin transport | 2.99E-03 |
| 42 | GO:0010143: cutin biosynthetic process | 2.99E-03 |
| 43 | GO:0006833: water transport | 3.48E-03 |
| 44 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.48E-03 |
| 45 | GO:0048511: rhythmic process | 4.26E-03 |
| 46 | GO:0003333: amino acid transmembrane transport | 4.26E-03 |
| 47 | GO:0009411: response to UV | 4.81E-03 |
| 48 | GO:0009739: response to gibberellin | 5.00E-03 |
| 49 | GO:0048443: stamen development | 5.09E-03 |
| 50 | GO:0006284: base-excision repair | 5.09E-03 |
| 51 | GO:0000413: protein peptidyl-prolyl isomerization | 5.68E-03 |
| 52 | GO:0042335: cuticle development | 5.68E-03 |
| 53 | GO:0034220: ion transmembrane transport | 5.68E-03 |
| 54 | GO:0042752: regulation of circadian rhythm | 6.28E-03 |
| 55 | GO:0007165: signal transduction | 6.35E-03 |
| 56 | GO:0009749: response to glucose | 6.60E-03 |
| 57 | GO:0009826: unidimensional cell growth | 6.65E-03 |
| 58 | GO:0009658: chloroplast organization | 6.91E-03 |
| 59 | GO:0009630: gravitropism | 7.24E-03 |
| 60 | GO:0030163: protein catabolic process | 7.57E-03 |
| 61 | GO:0009639: response to red or far red light | 7.90E-03 |
| 62 | GO:0010027: thylakoid membrane organization | 8.93E-03 |
| 63 | GO:0009627: systemic acquired resistance | 9.65E-03 |
| 64 | GO:0015979: photosynthesis | 9.79E-03 |
| 65 | GO:0010411: xyloglucan metabolic process | 1.00E-02 |
| 66 | GO:0071555: cell wall organization | 1.01E-02 |
| 67 | GO:0010311: lateral root formation | 1.11E-02 |
| 68 | GO:0010218: response to far red light | 1.15E-02 |
| 69 | GO:0007568: aging | 1.19E-02 |
| 70 | GO:0048527: lateral root development | 1.19E-02 |
| 71 | GO:0006865: amino acid transport | 1.23E-02 |
| 72 | GO:0009637: response to blue light | 1.27E-02 |
| 73 | GO:0006281: DNA repair | 1.27E-02 |
| 74 | GO:0030001: metal ion transport | 1.39E-02 |
| 75 | GO:0009744: response to sucrose | 1.52E-02 |
| 76 | GO:0009640: photomorphogenesis | 1.52E-02 |
| 77 | GO:0006857: oligopeptide transport | 1.97E-02 |
| 78 | GO:0009735: response to cytokinin | 2.06E-02 |
| 79 | GO:0007275: multicellular organism development | 2.37E-02 |
| 80 | GO:0042545: cell wall modification | 2.37E-02 |
| 81 | GO:0006412: translation | 2.52E-02 |
| 82 | GO:0055085: transmembrane transport | 2.86E-02 |
| 83 | GO:0009790: embryo development | 3.17E-02 |
| 84 | GO:0006633: fatty acid biosynthetic process | 3.33E-02 |
| 85 | GO:0040008: regulation of growth | 3.45E-02 |
| 86 | GO:0007623: circadian rhythm | 3.57E-02 |
| 87 | GO:0006470: protein dephosphorylation | 3.92E-02 |
| 88 | GO:0042742: defense response to bacterium | 4.55E-02 |
| 89 | GO:0042254: ribosome biogenesis | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 4 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 5 | GO:0005528: FK506 binding | 3.92E-06 |
| 6 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.73E-06 |
| 7 | GO:0030570: pectate lyase activity | 7.58E-06 |
| 8 | GO:0016829: lyase activity | 2.99E-05 |
| 9 | GO:0015200: methylammonium transmembrane transporter activity | 6.74E-05 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 1.62E-04 |
| 11 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.75E-04 |
| 12 | GO:0090729: toxin activity | 2.75E-04 |
| 13 | GO:0016851: magnesium chelatase activity | 3.98E-04 |
| 14 | GO:0046556: alpha-L-arabinofuranosidase activity | 5.32E-04 |
| 15 | GO:0015204: urea transmembrane transporter activity | 5.32E-04 |
| 16 | GO:0010011: auxin binding | 5.32E-04 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 5.32E-04 |
| 18 | GO:0009044: xylan 1,4-beta-xylosidase activity | 5.32E-04 |
| 19 | GO:0016791: phosphatase activity | 5.67E-04 |
| 20 | GO:0015250: water channel activity | 6.71E-04 |
| 21 | GO:0008725: DNA-3-methyladenine glycosylase activity | 6.73E-04 |
| 22 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 8.23E-04 |
| 23 | GO:0008519: ammonium transmembrane transporter activity | 8.23E-04 |
| 24 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 8.23E-04 |
| 25 | GO:0031177: phosphopantetheine binding | 8.23E-04 |
| 26 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 9.79E-04 |
| 27 | GO:0000035: acyl binding | 9.79E-04 |
| 28 | GO:0003993: acid phosphatase activity | 1.13E-03 |
| 29 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.32E-03 |
| 30 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.50E-03 |
| 31 | GO:0015171: amino acid transmembrane transporter activity | 2.04E-03 |
| 32 | GO:0004650: polygalacturonase activity | 2.39E-03 |
| 33 | GO:0010329: auxin efflux transmembrane transporter activity | 2.76E-03 |
| 34 | GO:0019843: rRNA binding | 3.25E-03 |
| 35 | GO:0003735: structural constituent of ribosome | 5.93E-03 |
| 36 | GO:0008236: serine-type peptidase activity | 1.04E-02 |
| 37 | GO:0005096: GTPase activator activity | 1.11E-02 |
| 38 | GO:0004722: protein serine/threonine phosphatase activity | 1.13E-02 |
| 39 | GO:0046872: metal ion binding | 1.57E-02 |
| 40 | GO:0015293: symporter activity | 1.65E-02 |
| 41 | GO:0045330: aspartyl esterase activity | 2.02E-02 |
| 42 | GO:0030599: pectinesterase activity | 2.31E-02 |
| 43 | GO:0016746: transferase activity, transferring acyl groups | 2.47E-02 |
| 44 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.98E-02 |
| 45 | GO:0004252: serine-type endopeptidase activity | 3.05E-02 |
| 46 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.39E-02 |
| 47 | GO:0046910: pectinesterase inhibitor activity | 3.39E-02 |
| 48 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.23E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.23E-07 |
| 3 | GO:0009507: chloroplast | 9.15E-07 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 9.74E-07 |
| 5 | GO:0031977: thylakoid lumen | 3.44E-06 |
| 6 | GO:0005576: extracellular region | 4.39E-06 |
| 7 | GO:0009579: thylakoid | 1.59E-05 |
| 8 | GO:0009534: chloroplast thylakoid | 1.64E-05 |
| 9 | GO:0042807: central vacuole | 2.32E-05 |
| 10 | GO:0043674: columella | 6.74E-05 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 7.22E-05 |
| 12 | GO:0009941: chloroplast envelope | 1.02E-04 |
| 13 | GO:0009505: plant-type cell wall | 1.10E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 2.75E-04 |
| 15 | GO:0009531: secondary cell wall | 3.98E-04 |
| 16 | GO:0016020: membrane | 4.01E-04 |
| 17 | GO:0009986: cell surface | 1.14E-03 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 1.14E-03 |
| 19 | GO:0005618: cell wall | 1.24E-03 |
| 20 | GO:0000326: protein storage vacuole | 1.50E-03 |
| 21 | GO:0008180: COP9 signalosome | 1.69E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 2.99E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 3.99E-03 |
| 24 | GO:0015935: small ribosomal subunit | 4.26E-03 |
| 25 | GO:0009705: plant-type vacuole membrane | 4.48E-03 |
| 26 | GO:0005886: plasma membrane | 5.39E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 6.60E-03 |
| 28 | GO:0005840: ribosome | 1.07E-02 |
| 29 | GO:0019005: SCF ubiquitin ligase complex | 1.08E-02 |
| 30 | GO:0009506: plasmodesma | 1.31E-02 |
| 31 | GO:0005774: vacuolar membrane | 1.37E-02 |
| 32 | GO:0048046: apoplast | 1.47E-02 |
| 33 | GO:0005887: integral component of plasma membrane | 1.72E-02 |
| 34 | GO:0000502: proteasome complex | 1.88E-02 |
| 35 | GO:0005773: vacuole | 2.59E-02 |
| 36 | GO:0031225: anchored component of membrane | 3.52E-02 |
| 37 | GO:0005768: endosome | 4.10E-02 |