gene detail

Gene description

TAIR ID: AT5G12900

No short description

Pathogen responsiveness: -0.29

General responsiveness: -1.05

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G001541

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

protein binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT1G13450, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-1.84	2.27E-06
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.84	1.67E-06
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.63	7.45E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.58	5.06E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.00	1.32E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.66	7.88E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.72	3.18E-10
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.85	1.86E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.14	4.07E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.54	9.96E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.03	1.13E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.51	2.72E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.82	6.27E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.94	1.93E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.31	2.20E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.36	1.67E-16
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.75	5.91E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.31	3.27E-12
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.89	2.15E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.63	7.41E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.64	5.75E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.16	5.37E-03