GO Enrichment Analysis of Co-expressed Genes with
AT5G12900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 3 | GO:0045489: pectin biosynthetic process | 9.11E-07 |
| 4 | GO:0052543: callose deposition in cell wall | 6.75E-05 |
| 5 | GO:0000066: mitochondrial ornithine transport | 1.12E-04 |
| 6 | GO:1901349: glucosinolate transport | 1.12E-04 |
| 7 | GO:0031539: positive regulation of anthocyanin metabolic process | 1.12E-04 |
| 8 | GO:0090449: phloem glucosinolate loading | 1.12E-04 |
| 9 | GO:0016051: carbohydrate biosynthetic process | 1.97E-04 |
| 10 | GO:0009767: photosynthetic electron transport chain | 2.36E-04 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.61E-04 |
| 12 | GO:0006152: purine nucleoside catabolic process | 2.61E-04 |
| 13 | GO:0019388: galactose catabolic process | 2.61E-04 |
| 14 | GO:0042546: cell wall biogenesis | 2.94E-04 |
| 15 | GO:0071555: cell wall organization | 3.12E-04 |
| 16 | GO:0005977: glycogen metabolic process | 4.32E-04 |
| 17 | GO:0006011: UDP-glucose metabolic process | 4.32E-04 |
| 18 | GO:0006000: fructose metabolic process | 4.32E-04 |
| 19 | GO:0080167: response to karrikin | 4.73E-04 |
| 20 | GO:0009590: detection of gravity | 6.19E-04 |
| 21 | GO:0046902: regulation of mitochondrial membrane permeability | 6.19E-04 |
| 22 | GO:0009963: positive regulation of flavonoid biosynthetic process | 6.19E-04 |
| 23 | GO:0000271: polysaccharide biosynthetic process | 6.82E-04 |
| 24 | GO:0006810: transport | 6.85E-04 |
| 25 | GO:0006546: glycine catabolic process | 8.23E-04 |
| 26 | GO:0019464: glycine decarboxylation via glycine cleavage system | 8.23E-04 |
| 27 | GO:0009765: photosynthesis, light harvesting | 8.23E-04 |
| 28 | GO:0019252: starch biosynthetic process | 8.42E-04 |
| 29 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 8.98E-04 |
| 30 | GO:0010236: plastoquinone biosynthetic process | 1.04E-03 |
| 31 | GO:0016123: xanthophyll biosynthetic process | 1.04E-03 |
| 32 | GO:0010942: positive regulation of cell death | 1.27E-03 |
| 33 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.27E-03 |
| 34 | GO:0010411: xyloglucan metabolic process | 1.49E-03 |
| 35 | GO:0017148: negative regulation of translation | 1.52E-03 |
| 36 | GO:0051510: regulation of unidimensional cell growth | 1.78E-03 |
| 37 | GO:0010218: response to far red light | 1.82E-03 |
| 38 | GO:0008610: lipid biosynthetic process | 2.06E-03 |
| 39 | GO:0005978: glycogen biosynthetic process | 2.06E-03 |
| 40 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.06E-03 |
| 41 | GO:0009637: response to blue light | 2.08E-03 |
| 42 | GO:0010099: regulation of photomorphogenesis | 2.35E-03 |
| 43 | GO:0006002: fructose 6-phosphate metabolic process | 2.35E-03 |
| 44 | GO:0022900: electron transport chain | 2.35E-03 |
| 45 | GO:0048193: Golgi vesicle transport | 2.35E-03 |
| 46 | GO:0009056: catabolic process | 2.66E-03 |
| 47 | GO:0010114: response to red light | 2.68E-03 |
| 48 | GO:0051555: flavonol biosynthetic process | 3.30E-03 |
| 49 | GO:0000272: polysaccharide catabolic process | 3.65E-03 |
| 50 | GO:0048229: gametophyte development | 3.65E-03 |
| 51 | GO:0019684: photosynthesis, light reaction | 3.65E-03 |
| 52 | GO:0016925: protein sumoylation | 4.00E-03 |
| 53 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.00E-03 |
| 54 | GO:0006006: glucose metabolic process | 4.36E-03 |
| 55 | GO:0030036: actin cytoskeleton organization | 4.36E-03 |
| 56 | GO:0006094: gluconeogenesis | 4.36E-03 |
| 57 | GO:0005986: sucrose biosynthetic process | 4.36E-03 |
| 58 | GO:0010143: cutin biosynthetic process | 4.74E-03 |
| 59 | GO:0019253: reductive pentose-phosphate cycle | 4.74E-03 |
| 60 | GO:0042343: indole glucosinolate metabolic process | 5.13E-03 |
| 61 | GO:0042753: positive regulation of circadian rhythm | 5.52E-03 |
| 62 | GO:0006487: protein N-linked glycosylation | 5.93E-03 |
| 63 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.35E-03 |
| 64 | GO:0098542: defense response to other organism | 6.78E-03 |
| 65 | GO:0010017: red or far-red light signaling pathway | 7.22E-03 |
| 66 | GO:0040007: growth | 7.67E-03 |
| 67 | GO:0019722: calcium-mediated signaling | 8.13E-03 |
| 68 | GO:0016117: carotenoid biosynthetic process | 8.60E-03 |
| 69 | GO:0048653: anther development | 9.08E-03 |
| 70 | GO:0009741: response to brassinosteroid | 9.57E-03 |
| 71 | GO:0009958: positive gravitropism | 9.57E-03 |
| 72 | GO:0007059: chromosome segregation | 1.01E-02 |
| 73 | GO:0009791: post-embryonic development | 1.06E-02 |
| 74 | GO:0007264: small GTPase mediated signal transduction | 1.16E-02 |
| 75 | GO:0010583: response to cyclopentenone | 1.16E-02 |
| 76 | GO:0007267: cell-cell signaling | 1.33E-02 |
| 77 | GO:0051607: defense response to virus | 1.38E-02 |
| 78 | GO:0016126: sterol biosynthetic process | 1.44E-02 |
| 79 | GO:0009860: pollen tube growth | 1.47E-02 |
| 80 | GO:0016311: dephosphorylation | 1.68E-02 |
| 81 | GO:0018298: protein-chromophore linkage | 1.74E-02 |
| 82 | GO:0009813: flavonoid biosynthetic process | 1.80E-02 |
| 83 | GO:0009853: photorespiration | 2.06E-02 |
| 84 | GO:0006839: mitochondrial transport | 2.25E-02 |
| 85 | GO:0016042: lipid catabolic process | 2.43E-02 |
| 86 | GO:0009744: response to sucrose | 2.46E-02 |
| 87 | GO:0009640: photomorphogenesis | 2.46E-02 |
| 88 | GO:0008152: metabolic process | 2.76E-02 |
| 89 | GO:0031347: regulation of defense response | 2.82E-02 |
| 90 | GO:0009809: lignin biosynthetic process | 3.04E-02 |
| 91 | GO:0009585: red, far-red light phototransduction | 3.04E-02 |
| 92 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.12E-02 |
| 93 | GO:0010224: response to UV-B | 3.12E-02 |
| 94 | GO:0006857: oligopeptide transport | 3.20E-02 |
| 95 | GO:0048367: shoot system development | 3.51E-02 |
| 96 | GO:0048316: seed development | 3.51E-02 |
| 97 | GO:0009740: gibberellic acid mediated signaling pathway | 3.75E-02 |
| 98 | GO:0005975: carbohydrate metabolic process | 4.00E-02 |
| 99 | GO:0009742: brassinosteroid mediated signaling pathway | 4.08E-02 |
| 100 | GO:0046686: response to cadmium ion | 4.13E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 2 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0047974: guanosine deaminase activity | 0.00E+00 |
| 5 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 6 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.84E-05 |
| 7 | GO:0090448: glucosinolate:proton symporter activity | 1.12E-04 |
| 8 | GO:0010313: phytochrome binding | 1.12E-04 |
| 9 | GO:0004614: phosphoglucomutase activity | 2.61E-04 |
| 10 | GO:0010291: carotene beta-ring hydroxylase activity | 2.61E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.61E-04 |
| 12 | GO:0004047: aminomethyltransferase activity | 2.61E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.61E-04 |
| 14 | GO:0000064: L-ornithine transmembrane transporter activity | 2.61E-04 |
| 15 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.61E-04 |
| 16 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 4.32E-04 |
| 17 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.96E-04 |
| 18 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 6.19E-04 |
| 19 | GO:0001872: (1->3)-beta-D-glucan binding | 6.19E-04 |
| 20 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.19E-04 |
| 21 | GO:0048027: mRNA 5'-UTR binding | 6.19E-04 |
| 22 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.19E-04 |
| 23 | GO:0045430: chalcone isomerase activity | 8.23E-04 |
| 24 | GO:0016758: transferase activity, transferring hexosyl groups | 8.24E-04 |
| 25 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.98E-04 |
| 26 | GO:0031386: protein tag | 1.04E-03 |
| 27 | GO:0005471: ATP:ADP antiporter activity | 1.04E-03 |
| 28 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.27E-03 |
| 29 | GO:0080030: methyl indole-3-acetate esterase activity | 1.27E-03 |
| 30 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.27E-03 |
| 31 | GO:0102229: amylopectin maltohydrolase activity | 1.27E-03 |
| 32 | GO:0042578: phosphoric ester hydrolase activity | 1.27E-03 |
| 33 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.49E-03 |
| 34 | GO:0016161: beta-amylase activity | 1.52E-03 |
| 35 | GO:0016621: cinnamoyl-CoA reductase activity | 1.78E-03 |
| 36 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.06E-03 |
| 37 | GO:0016788: hydrolase activity, acting on ester bonds | 2.24E-03 |
| 38 | GO:0052689: carboxylic ester hydrolase activity | 3.26E-03 |
| 39 | GO:0008081: phosphoric diester hydrolase activity | 4.36E-03 |
| 40 | GO:0031072: heat shock protein binding | 4.36E-03 |
| 41 | GO:0022857: transmembrane transporter activity | 4.80E-03 |
| 42 | GO:0031409: pigment binding | 5.52E-03 |
| 43 | GO:0004176: ATP-dependent peptidase activity | 6.78E-03 |
| 44 | GO:0008194: UDP-glycosyltransferase activity | 9.85E-03 |
| 45 | GO:0004518: nuclease activity | 1.16E-02 |
| 46 | GO:0016757: transferase activity, transferring glycosyl groups | 1.18E-02 |
| 47 | GO:0016791: phosphatase activity | 1.27E-02 |
| 48 | GO:0005200: structural constituent of cytoskeleton | 1.33E-02 |
| 49 | GO:0008483: transaminase activity | 1.33E-02 |
| 50 | GO:0008237: metallopeptidase activity | 1.33E-02 |
| 51 | GO:0016597: amino acid binding | 1.38E-02 |
| 52 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.39E-02 |
| 53 | GO:0016168: chlorophyll binding | 1.50E-02 |
| 54 | GO:0008375: acetylglucosaminyltransferase activity | 1.56E-02 |
| 55 | GO:0030247: polysaccharide binding | 1.62E-02 |
| 56 | GO:0004222: metalloendopeptidase activity | 1.86E-02 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.06E-02 |
| 58 | GO:0004185: serine-type carboxypeptidase activity | 2.46E-02 |
| 59 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.60E-02 |
| 60 | GO:0005198: structural molecule activity | 2.67E-02 |
| 61 | GO:0009055: electron carrier activity | 2.69E-02 |
| 62 | GO:0003690: double-stranded DNA binding | 3.12E-02 |
| 63 | GO:0046872: metal ion binding | 3.47E-02 |
| 64 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.67E-02 |
| 65 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.67E-02 |
| 66 | GO:0004650: polygalacturonase activity | 3.67E-02 |
| 67 | GO:0051082: unfolded protein binding | 3.91E-02 |
| 68 | GO:0015035: protein disulfide oxidoreductase activity | 3.99E-02 |
| 69 | GO:0016746: transferase activity, transferring acyl groups | 3.99E-02 |
| 70 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.68E-02 |
| 71 | GO:0016829: lyase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009941: chloroplast envelope | 1.78E-04 |
| 3 | GO:0030095: chloroplast photosystem II | 2.68E-04 |
| 4 | GO:0009654: photosystem II oxygen evolving complex | 4.13E-04 |
| 5 | GO:0009570: chloroplast stroma | 4.61E-04 |
| 6 | GO:0005960: glycine cleavage complex | 6.19E-04 |
| 7 | GO:0009507: chloroplast | 7.85E-04 |
| 8 | GO:0019898: extrinsic component of membrane | 8.42E-04 |
| 9 | GO:0010319: stromule | 1.14E-03 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 1.57E-03 |
| 11 | GO:0009505: plant-type cell wall | 2.07E-03 |
| 12 | GO:0009534: chloroplast thylakoid | 2.69E-03 |
| 13 | GO:0009506: plasmodesma | 2.83E-03 |
| 14 | GO:0005765: lysosomal membrane | 3.65E-03 |
| 15 | GO:0031225: anchored component of membrane | 3.97E-03 |
| 16 | GO:0048046: apoplast | 4.09E-03 |
| 17 | GO:0005743: mitochondrial inner membrane | 4.30E-03 |
| 18 | GO:0019013: viral nucleocapsid | 4.36E-03 |
| 19 | GO:0030076: light-harvesting complex | 5.13E-03 |
| 20 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.13E-03 |
| 21 | GO:0005794: Golgi apparatus | 6.12E-03 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 6.38E-03 |
| 23 | GO:0000139: Golgi membrane | 9.33E-03 |
| 24 | GO:0009522: photosystem I | 1.01E-02 |
| 25 | GO:0009523: photosystem II | 1.06E-02 |
| 26 | GO:0046658: anchored component of plasma membrane | 1.17E-02 |
| 27 | GO:0009579: thylakoid | 1.23E-02 |
| 28 | GO:0000786: nucleosome | 1.99E-02 |
| 29 | GO:0005819: spindle | 2.19E-02 |
| 30 | GO:0031902: late endosome membrane | 2.32E-02 |
| 31 | GO:0005856: cytoskeleton | 2.67E-02 |
| 32 | GO:0009536: plastid | 3.07E-02 |
| 33 | GO:0010287: plastoglobule | 4.42E-02 |