Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G12900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010248: establishment or maintenance of transmembrane electrochemical gradient0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
4GO:0048229: gametophyte development6.19E-06
5GO:0010480: microsporocyte differentiation1.21E-05
6GO:0000066: mitochondrial ornithine transport1.21E-05
7GO:0019388: galactose catabolic process3.21E-05
8GO:0046417: chorismate metabolic process5.78E-05
9GO:0009590: detection of gravity8.79E-05
10GO:0009765: photosynthesis, light harvesting1.22E-04
11GO:1900425: negative regulation of defense response to bacterium1.98E-04
12GO:0009635: response to herbicide1.98E-04
13GO:0010304: PSII associated light-harvesting complex II catabolic process1.98E-04
14GO:0017148: negative regulation of translation2.39E-04
15GO:0098869: cellular oxidant detoxification2.82E-04
16GO:0048437: floral organ development2.82E-04
17GO:0052543: callose deposition in cell wall3.27E-04
18GO:0005978: glycogen biosynthetic process3.27E-04
19GO:0022900: electron transport chain3.73E-04
20GO:0048193: Golgi vesicle transport3.73E-04
21GO:0010192: mucilage biosynthetic process5.20E-04
22GO:0009073: aromatic amino acid family biosynthetic process5.71E-04
23GO:0015706: nitrate transport6.23E-04
24GO:0006006: glucose metabolic process6.76E-04
25GO:0010075: regulation of meristem growth6.76E-04
26GO:0009934: regulation of meristem structural organization7.31E-04
27GO:0010167: response to nitrate7.88E-04
28GO:0009833: plant-type primary cell wall biogenesis8.44E-04
29GO:0009768: photosynthesis, light harvesting in photosystem I9.61E-04
30GO:0015992: proton transport1.02E-03
31GO:0019722: calcium-mediated signaling1.21E-03
32GO:0048653: anther development1.34E-03
33GO:0007059: chromosome segregation1.47E-03
34GO:0019252: starch biosynthetic process1.54E-03
35GO:0010583: response to cyclopentenone1.68E-03
36GO:0007264: small GTPase mediated signal transduction1.68E-03
37GO:0007267: cell-cell signaling1.91E-03
38GO:0051607: defense response to virus1.98E-03
39GO:0042128: nitrate assimilation2.22E-03
40GO:0030244: cellulose biosynthetic process2.46E-03
41GO:0018298: protein-chromophore linkage2.46E-03
42GO:0009832: plant-type cell wall biogenesis2.55E-03
43GO:0010218: response to far red light2.63E-03
44GO:0009637: response to blue light2.89E-03
45GO:0006839: mitochondrial transport3.15E-03
46GO:0010114: response to red light3.43E-03
47GO:0009926: auxin polar transport3.43E-03
48GO:0006857: oligopeptide transport4.40E-03
49GO:0009414: response to water deprivation5.09E-03
50GO:0071555: cell wall organization5.22E-03
51GO:0005975: carbohydrate metabolic process7.91E-03
52GO:0048366: leaf development1.19E-02
53GO:0080167: response to karrikin1.23E-02
54GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.26E-02
55GO:0015979: photosynthesis1.35E-02
56GO:0009408: response to heat1.62E-02
57GO:0009734: auxin-activated signaling pathway2.07E-02
58GO:0051301: cell division2.60E-02
59GO:0006468: protein phosphorylation4.05E-02
60GO:0030154: cell differentiation4.29E-02
RankGO TermAdjusted P value
1GO:0010313: phytochrome binding1.21E-05
2GO:0004106: chorismate mutase activity3.21E-05
3GO:0004614: phosphoglucomutase activity3.21E-05
4GO:0016868: intramolecular transferase activity, phosphotransferases3.21E-05
5GO:0000064: L-ornithine transmembrane transporter activity3.21E-05
6GO:0009678: hydrogen-translocating pyrophosphatase activity8.79E-05
7GO:0001872: (1->3)-beta-D-glucan binding8.79E-05
8GO:0048027: mRNA 5'-UTR binding8.79E-05
9GO:0016688: L-ascorbate peroxidase activity1.98E-04
10GO:0004427: inorganic diphosphatase activity2.82E-04
11GO:0015112: nitrate transmembrane transporter activity4.69E-04
12GO:0031409: pigment binding8.44E-04
13GO:0008134: transcription factor binding9.02E-04
14GO:0004176: ATP-dependent peptidase activity1.02E-03
15GO:0033612: receptor serine/threonine kinase binding1.02E-03
16GO:0016760: cellulose synthase (UDP-forming) activity1.14E-03
17GO:0004518: nuclease activity1.68E-03
18GO:0016759: cellulose synthase activity1.83E-03
19GO:0008237: metallopeptidase activity1.91E-03
20GO:0016168: chlorophyll binding2.14E-03
21GO:0030247: polysaccharide binding2.30E-03
22GO:0004222: metalloendopeptidase activity2.63E-03
23GO:0051537: 2 iron, 2 sulfur cluster binding3.61E-03
24GO:0043621: protein self-association3.61E-03
25GO:0015293: symporter activity3.71E-03
26GO:0046872: metal ion binding4.47E-03
27GO:0004650: polygalacturonase activity5.02E-03
28GO:0016829: lyase activity6.58E-03
29GO:0000287: magnesium ion binding1.04E-02
30GO:0046982: protein heterodimerization activity1.04E-02
31GO:0004871: signal transducer activity1.45E-02
32GO:0009055: electron carrier activity1.71E-02
33GO:0016887: ATPase activity2.22E-02
34GO:0004674: protein serine/threonine kinase activity2.58E-02
35GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.98E-02
36GO:0005525: GTP binding3.48E-02
37GO:0005215: transporter activity4.34E-02
RankGO TermAdjusted P value
1GO:0005765: lysosomal membrane5.71E-04
2GO:0046658: anchored component of plasma membrane7.22E-04
3GO:0030076: light-harvesting complex7.88E-04
4GO:0009536: plastid8.31E-04
5GO:0009505: plant-type cell wall8.54E-04
6GO:0005743: mitochondrial inner membrane1.38E-03
7GO:0009522: photosystem I1.47E-03
8GO:0009523: photosystem II1.54E-03
9GO:0010319: stromule1.91E-03
10GO:0000325: plant-type vacuole2.71E-03
11GO:0000786: nucleosome2.80E-03
12GO:0005819: spindle3.06E-03
13GO:0009579: thylakoid3.10E-03
14GO:0031902: late endosome membrane3.24E-03
15GO:0031225: anchored component of membrane4.03E-03
16GO:0016021: integral component of membrane4.12E-03
17GO:0009941: chloroplast envelope4.45E-03
18GO:0010008: endosome membrane4.81E-03
19GO:0005794: Golgi apparatus5.76E-03
20GO:0010287: plastoglobule6.01E-03
21GO:0009705: plant-type vacuole membrane7.79E-03
22GO:0005886: plasma membrane8.05E-03
23GO:0009535: chloroplast thylakoid membrane1.17E-02
24GO:0009507: chloroplast1.29E-02
25GO:0009506: plasmodesma1.66E-02
26GO:0048046: apoplast1.90E-02
27GO:0009534: chloroplast thylakoid2.79E-02
28GO:0009570: chloroplast stroma3.44E-02
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Gene type



Gene DE type