Gene: AT5G06980
     

Gene description


TAIR ID: AT5G06980

No short description

Pathogen responsiveness: 0.77

General responsiveness: 0.94

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, response to karrikin, transcription


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G15210, AT1G24260, AT2G20180, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.132.23E-04
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.191.65E-04
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.874.51E-02
GSE17464Laer, controlLaer, PstDC3000 12 h-2.311.15E-02
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.874.09E-02
GSE17464Penta, controlPenta, PstDC3000 12 h-2.514.29E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.724.83E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-4.721.13E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-5.691.83E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-4.651.14E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-5.315.04E-14
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.212.15E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.331.35E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.021.29E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.287.90E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.477.09E-16
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.891.47E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.925.15E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-3.052.35E-02
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.931.16E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.711.52E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-3.032.15E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.704.04E-02






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