Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G06980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:0007623: circadian rhythm1.14E-08
4GO:0009723: response to ethylene2.90E-06
5GO:0050801: ion homeostasis1.48E-05
6GO:0043496: regulation of protein homodimerization activity3.88E-05
7GO:0071497: cellular response to freezing3.88E-05
8GO:0042754: negative regulation of circadian rhythm3.88E-05
9GO:0050684: regulation of mRNA processing3.88E-05
10GO:0010447: response to acidic pH6.95E-05
11GO:0009651: response to salt stress9.12E-05
12GO:0015846: polyamine transport1.45E-04
13GO:1901141: regulation of lignin biosynthetic process1.45E-04
14GO:0010023: proanthocyanidin biosynthetic process1.45E-04
15GO:0016123: xanthophyll biosynthetic process1.88E-04
16GO:0000245: spliceosomal complex assembly2.82E-04
17GO:2000067: regulation of root morphogenesis2.82E-04
18GO:1900056: negative regulation of leaf senescence3.32E-04
19GO:0045893: positive regulation of transcription, DNA-templated4.33E-04
20GO:0010100: negative regulation of photomorphogenesis4.37E-04
21GO:0048574: long-day photoperiodism, flowering4.37E-04
22GO:0010380: regulation of chlorophyll biosynthetic process5.49E-04
23GO:0009688: abscisic acid biosynthetic process6.08E-04
24GO:0009641: shade avoidance6.08E-04
25GO:0009739: response to gibberellin7.76E-04
26GO:0018107: peptidyl-threonine phosphorylation7.91E-04
27GO:0009718: anthocyanin-containing compound biosynthetic process7.91E-04
28GO:0010223: secondary shoot formation8.55E-04
29GO:0009266: response to temperature stimulus8.55E-04
30GO:0010039: response to iron ion9.19E-04
31GO:0003333: amino acid transmembrane transport1.19E-03
32GO:0010017: red or far-red light signaling pathway1.26E-03
33GO:0046686: response to cadmium ion1.52E-03
34GO:0045892: negative regulation of transcription, DNA-templated1.56E-03
35GO:0010182: sugar mediated signaling pathway1.65E-03
36GO:0055072: iron ion homeostasis1.81E-03
37GO:0009751: response to salicylic acid1.86E-03
38GO:0009753: response to jasmonic acid2.02E-03
39GO:0009737: response to abscisic acid2.25E-03
40GO:0015995: chlorophyll biosynthetic process2.70E-03
41GO:0000160: phosphorelay signal transduction system3.00E-03
42GO:0006355: regulation of transcription, DNA-templated3.01E-03
43GO:0009910: negative regulation of flower development3.20E-03
44GO:0009631: cold acclimation3.20E-03
45GO:0006865: amino acid transport3.30E-03
46GO:0035556: intracellular signal transduction3.49E-03
47GO:0010114: response to red light4.04E-03
48GO:0009644: response to high light intensity4.26E-03
49GO:0006351: transcription, DNA-templated4.37E-03
50GO:0018105: peptidyl-serine phosphorylation6.44E-03
51GO:0009414: response to water deprivation6.50E-03
52GO:0009790: embryo development8.21E-03
53GO:0010468: regulation of gene expression1.04E-02
54GO:0009658: chloroplast organization1.25E-02
55GO:0006970: response to osmotic stress1.32E-02
56GO:0009860: pollen tube growth1.32E-02
57GO:0044550: secondary metabolite biosynthetic process1.55E-02
58GO:0032259: methylation1.87E-02
59GO:0006629: lipid metabolic process1.93E-02
60GO:0009408: response to heat1.93E-02
61GO:0008152: metabolic process2.07E-02
62GO:0006457: protein folding3.49E-02
63GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0019904: protein domain specific binding8.48E-06
3GO:0080045: quercetin 3'-O-glucosyltransferase activity3.88E-05
4GO:0010277: chlorophyllide a oxygenase [overall] activity6.95E-05
5GO:0015203: polyamine transmembrane transporter activity1.05E-04
6GO:0080046: quercetin 4'-O-glucosyltransferase activity2.34E-04
7GO:0000989: transcription factor activity, transcription factor binding4.93E-04
8GO:0071949: FAD binding4.93E-04
9GO:0015174: basic amino acid transmembrane transporter activity5.49E-04
10GO:0004190: aspartic-type endopeptidase activity9.19E-04
11GO:0003700: transcription factor activity, sequence-specific DNA binding1.16E-03
12GO:0003727: single-stranded RNA binding1.41E-03
13GO:0003677: DNA binding1.62E-03
14GO:0000156: phosphorelay response regulator activity2.07E-03
15GO:0042393: histone binding3.71E-03
16GO:0051537: 2 iron, 2 sulfur cluster binding4.26E-03
17GO:0015293: symporter activity4.37E-03
18GO:0016298: lipase activity5.07E-03
19GO:0015171: amino acid transmembrane transporter activity5.31E-03
20GO:0080043: quercetin 3-O-glucosyltransferase activity5.93E-03
21GO:0080044: quercetin 7-O-glucosyltransferase activity5.93E-03
22GO:0016874: ligase activity6.05E-03
23GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen7.51E-03
24GO:0015297: antiporter activity8.93E-03
25GO:0008194: UDP-glycosyltransferase activity9.99E-03
26GO:0008168: methyltransferase activity1.22E-02
27GO:0016787: hydrolase activity1.43E-02
28GO:0008233: peptidase activity1.44E-02
29GO:0005515: protein binding1.68E-02
30GO:0004674: protein serine/threonine kinase activity3.30E-02
31GO:0005506: iron ion binding4.74E-02
RankGO TermAdjusted P value
1GO:0030660: Golgi-associated vesicle membrane1.45E-04
2GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.45E-04
3GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.84E-04
4GO:0048226: Casparian strip3.84E-04
5GO:0005765: lysosomal membrane6.67E-04
6GO:0042651: thylakoid membrane1.12E-03
7GO:0010008: endosome membrane5.68E-03
8GO:0009706: chloroplast inner membrane6.31E-03
9GO:0031969: chloroplast membrane1.46E-02
10GO:0009535: chloroplast thylakoid membrane1.50E-02
11GO:0043231: intracellular membrane-bounded organelle2.07E-02
12GO:0005887: integral component of plasma membrane2.40E-02
13GO:0009507: chloroplast2.41E-02
14GO:0009941: chloroplast envelope3.15E-02
15GO:0005634: nucleus3.18E-02
16GO:0009570: chloroplast stroma4.38E-02
17GO:0005768: endosome4.45E-02
18GO:0005829: cytosol4.95E-02
Gene type



Gene DE type