Gene: AT5G04810
     

Gene description


TAIR ID: AT5G04810

Short description: pentatricopeptide (PPR) repeat-containing protein

Pathogen responsiveness: 0.30

General responsiveness: 0.49

Orthologous


Rice:

OS04G0684500   OS02G0118000   OS01G0785700   OS08G0499800   OS02G0633200   OS01G0793200  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


chloroplast


GO molecular function


unkown


Protein domain


PfamPF13812, Pentatricopeptide repeat domain
PfamPF01535, PPR repeat
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PfamPF13041, PPR repeat family
PfamPF12854, PPR repeat
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


29 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.868.08E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.826.77E-08
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.942.16E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.157.13E-04
GSE17464Laer, controlLaer, Flg22 1 h-1.702.64E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.053.00E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.471.56E-05
GSE17464Penta, controlPenta, Flg22 2 h-3.253.50E-07
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.041.67E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.967.15E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.552.80E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.954.11E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.876.23E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.703.65E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.292.04E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.134.41E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.174.19E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.741.04E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.864.80E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.511.08E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.882.53E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.837.30E-10
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.671.05E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.606.30E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.522.68E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.766.77E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.839.02E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.567.05E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.441.56E-03






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