co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000372: Group I intron splicing	0.00E+00
2	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
3	GO:0006114: glycerol biosynthetic process	0.00E+00
4	GO:0033528: S-methylmethionine cycle	0.00E+00
5	GO:1905177: tracheary element differentiation	0.00E+00
6	GO:0006399: tRNA metabolic process	0.00E+00
7	GO:0019685: photosynthesis, dark reaction	0.00E+00
8	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
9	GO:0045176: apical protein localization	0.00E+00
10	GO:0009583: detection of light stimulus	0.00E+00
11	GO:0071000: response to magnetism	0.00E+00
12	GO:2001141: regulation of RNA biosynthetic process	3.65E-05
13	GO:0009793: embryo development ending in seed dormancy	4.61E-05
14	GO:0010158: abaxial cell fate specification	1.03E-04
15	GO:0051510: regulation of unidimensional cell growth	2.64E-04
16	GO:0043266: regulation of potassium ion transport	3.19E-04
17	GO:0010080: regulation of floral meristem growth	3.19E-04
18	GO:0042547: cell wall modification involved in multidimensional cell growth	3.19E-04
19	GO:0015798: myo-inositol transport	3.19E-04
20	GO:0072387: flavin adenine dinucleotide metabolic process	3.19E-04
21	GO:0043087: regulation of GTPase activity	3.19E-04
22	GO:2000021: regulation of ion homeostasis	3.19E-04
23	GO:0043609: regulation of carbon utilization	3.19E-04
24	GO:0006436: tryptophanyl-tRNA aminoacylation	3.19E-04
25	GO:0000066: mitochondrial ornithine transport	3.19E-04
26	GO:0006419: alanyl-tRNA aminoacylation	3.19E-04
27	GO:0071482: cellular response to light stimulus	4.07E-04
28	GO:0000373: Group II intron splicing	4.90E-04
29	GO:0009086: methionine biosynthetic process	5.78E-04
30	GO:0010617: circadian regulation of calcium ion oscillation	6.97E-04
31	GO:0006435: threonyl-tRNA aminoacylation	6.97E-04
32	GO:0099402: plant organ development	6.97E-04
33	GO:0001736: establishment of planar polarity	6.97E-04
34	GO:0010343: singlet oxygen-mediated programmed cell death	6.97E-04
35	GO:1901529: positive regulation of anion channel activity	6.97E-04
36	GO:0048255: mRNA stabilization	6.97E-04
37	GO:0010569: regulation of double-strand break repair via homologous recombination	6.97E-04
38	GO:0006352: DNA-templated transcription, initiation	7.78E-04
39	GO:0010582: floral meristem determinacy	8.89E-04
40	GO:0006094: gluconeogenesis	1.01E-03
41	GO:0010022: meristem determinacy	1.13E-03
42	GO:0010623: programmed cell death involved in cell development	1.13E-03
43	GO:1901672: positive regulation of systemic acquired resistance	1.13E-03
44	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.13E-03
45	GO:0006696: ergosterol biosynthetic process	1.13E-03
46	GO:1902448: positive regulation of shade avoidance	1.13E-03
47	GO:0006000: fructose metabolic process	1.13E-03
48	GO:0090351: seedling development	1.26E-03
49	GO:0042989: sequestering of actin monomers	1.62E-03
50	GO:1901332: negative regulation of lateral root development	1.62E-03
51	GO:0051513: regulation of monopolar cell growth	1.62E-03
52	GO:0051639: actin filament network formation	1.62E-03
53	GO:0034059: response to anoxia	1.62E-03
54	GO:0009800: cinnamic acid biosynthetic process	1.62E-03
55	GO:0009451: RNA modification	1.73E-03
56	GO:0006730: one-carbon metabolic process	2.06E-03
57	GO:0010508: positive regulation of autophagy	2.18E-03
58	GO:1902347: response to strigolactone	2.18E-03
59	GO:0051781: positive regulation of cell division	2.18E-03
60	GO:0051764: actin crosslink formation	2.18E-03
61	GO:0051322: anaphase	2.18E-03
62	GO:0006661: phosphatidylinositol biosynthetic process	2.18E-03
63	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.25E-03
64	GO:0009664: plant-type cell wall organization	2.42E-03
65	GO:0016117: carotenoid biosynthetic process	2.65E-03
66	GO:0030041: actin filament polymerization	2.78E-03
67	GO:0010117: photoprotection	2.78E-03
68	GO:0046283: anthocyanin-containing compound metabolic process	2.78E-03
69	GO:0010236: plastoquinone biosynthetic process	2.78E-03
70	GO:0045038: protein import into chloroplast thylakoid membrane	2.78E-03
71	GO:1902183: regulation of shoot apical meristem development	2.78E-03
72	GO:0016123: xanthophyll biosynthetic process	2.78E-03
73	GO:0006465: signal peptide processing	2.78E-03
74	GO:0080110: sporopollenin biosynthetic process	2.78E-03
75	GO:0009658: chloroplast organization	3.26E-03
76	GO:0007059: chromosome segregation	3.32E-03
77	GO:1901371: regulation of leaf morphogenesis	3.43E-03
78	GO:0006559: L-phenylalanine catabolic process	3.43E-03
79	GO:0048827: phyllome development	3.43E-03
80	GO:0006555: methionine metabolic process	3.43E-03
81	GO:0060918: auxin transport	3.43E-03
82	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.43E-03
83	GO:0010310: regulation of hydrogen peroxide metabolic process	4.13E-03
84	GO:0042372: phylloquinone biosynthetic process	4.13E-03
85	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.13E-03
86	GO:0009828: plant-type cell wall loosening	4.61E-03
87	GO:0006400: tRNA modification	4.87E-03
88	GO:0006955: immune response	4.87E-03
89	GO:0010050: vegetative phase change	4.87E-03
90	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.87E-03
91	GO:0009911: positive regulation of flower development	5.50E-03
92	GO:0009850: auxin metabolic process	5.66E-03
93	GO:0042255: ribosome assembly	5.66E-03
94	GO:0006353: DNA-templated transcription, termination	5.66E-03
95	GO:0009704: de-etiolation	5.66E-03
96	GO:0045010: actin nucleation	5.66E-03
97	GO:0010492: maintenance of shoot apical meristem identity	5.66E-03
98	GO:0000105: histidine biosynthetic process	5.66E-03
99	GO:0048564: photosystem I assembly	5.66E-03
100	GO:0009657: plastid organization	6.49E-03
101	GO:0006002: fructose 6-phosphate metabolic process	6.49E-03
102	GO:0022900: electron transport chain	6.49E-03
103	GO:0018298: protein-chromophore linkage	7.19E-03
104	GO:2000024: regulation of leaf development	7.36E-03
105	GO:0048507: meristem development	7.36E-03
106	GO:0006098: pentose-phosphate shunt	7.36E-03
107	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.36E-03
108	GO:0010206: photosystem II repair	7.36E-03
109	GO:1900426: positive regulation of defense response to bacterium	8.27E-03
110	GO:0009638: phototropism	8.27E-03
111	GO:0035999: tetrahydrofolate interconversion	8.27E-03
112	GO:0045490: pectin catabolic process	8.33E-03
113	GO:0009637: response to blue light	9.12E-03
114	GO:0006535: cysteine biosynthetic process from serine	9.22E-03
115	GO:0048829: root cap development	9.22E-03
116	GO:0006949: syncytium formation	9.22E-03
117	GO:0006259: DNA metabolic process	9.22E-03
118	GO:0006415: translational termination	1.02E-02
119	GO:0009750: response to fructose	1.02E-02
120	GO:0048765: root hair cell differentiation	1.02E-02
121	GO:0006265: DNA topological change	1.02E-02
122	GO:0006839: mitochondrial transport	1.04E-02
123	GO:0045037: protein import into chloroplast stroma	1.12E-02
124	GO:0010114: response to red light	1.18E-02
125	GO:0009785: blue light signaling pathway	1.23E-02
126	GO:0010229: inflorescence development	1.23E-02
127	GO:0030036: actin cytoskeleton organization	1.23E-02
128	GO:0010075: regulation of meristem growth	1.23E-02
129	GO:0009767: photosynthetic electron transport chain	1.23E-02
130	GO:0010540: basipetal auxin transport	1.34E-02
131	GO:0010207: photosystem II assembly	1.34E-02
132	GO:0080188: RNA-directed DNA methylation	1.45E-02
133	GO:0007010: cytoskeleton organization	1.69E-02
134	GO:0051017: actin filament bundle assembly	1.69E-02
135	GO:0006289: nucleotide-excision repair	1.69E-02
136	GO:2000377: regulation of reactive oxygen species metabolic process	1.69E-02
137	GO:0005992: trehalose biosynthetic process	1.69E-02
138	GO:0019344: cysteine biosynthetic process	1.69E-02
139	GO:0009944: polarity specification of adaxial/abaxial axis	1.69E-02
140	GO:0006417: regulation of translation	1.76E-02
141	GO:0010073: meristem maintenance	1.81E-02
142	GO:0006825: copper ion transport	1.81E-02
143	GO:0006418: tRNA aminoacylation for protein translation	1.81E-02
144	GO:0006096: glycolytic process	1.88E-02
145	GO:0080167: response to karrikin	1.91E-02
146	GO:0003333: amino acid transmembrane transport	1.94E-02
147	GO:0016998: cell wall macromolecule catabolic process	1.94E-02
148	GO:0015992: proton transport	1.94E-02
149	GO:0048511: rhythmic process	1.94E-02
150	GO:0010431: seed maturation	1.94E-02
151	GO:0009416: response to light stimulus	1.94E-02
152	GO:0048316: seed development	1.95E-02
153	GO:0035428: hexose transmembrane transport	2.07E-02
154	GO:0009814: defense response, incompatible interaction	2.07E-02
155	GO:0019722: calcium-mediated signaling	2.33E-02
156	GO:0010089: xylem development	2.33E-02
157	GO:0010584: pollen exine formation	2.33E-02
158	GO:0008033: tRNA processing	2.61E-02
159	GO:0034220: ion transmembrane transport	2.61E-02
160	GO:0010118: stomatal movement	2.61E-02
161	GO:0010154: fruit development	2.75E-02
162	GO:0048868: pollen tube development	2.75E-02
163	GO:0046323: glucose import	2.75E-02
164	GO:0010268: brassinosteroid homeostasis	2.75E-02
165	GO:0009958: positive gravitropism	2.75E-02
166	GO:0042752: regulation of circadian rhythm	2.90E-02
167	GO:0009646: response to absence of light	2.90E-02
168	GO:0032259: methylation	2.95E-02
169	GO:0048825: cotyledon development	3.05E-02
170	GO:0009749: response to glucose	3.05E-02
171	GO:0008654: phospholipid biosynthetic process	3.05E-02
172	GO:0016132: brassinosteroid biosynthetic process	3.20E-02
173	GO:0009790: embryo development	3.32E-02
174	GO:0032502: developmental process	3.35E-02
175	GO:0007264: small GTPase mediated signal transduction	3.35E-02
176	GO:0010583: response to cyclopentenone	3.35E-02
177	GO:0016032: viral process	3.35E-02
178	GO:0010090: trichome morphogenesis	3.51E-02
179	GO:0006914: autophagy	3.67E-02
180	GO:0016125: sterol metabolic process	3.67E-02
181	GO:0007267: cell-cell signaling	3.83E-02
182	GO:0000910: cytokinesis	3.99E-02
183	GO:0016126: sterol biosynthetic process	4.16E-02
184	GO:0001666: response to hypoxia	4.16E-02
185	GO:0010411: xyloglucan metabolic process	4.67E-02
186	GO:0009734: auxin-activated signaling pathway	4.74E-02
187	GO:0016311: dephosphorylation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
3	GO:0046905: phytoene synthase activity	0.00E+00
4	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0005048: signal sequence binding	0.00E+00
7	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
8	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
9	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
10	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
11	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
12	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
13	GO:0001053: plastid sigma factor activity	6.53E-05
14	GO:0016987: sigma factor activity	6.53E-05
15	GO:0030570: pectate lyase activity	2.15E-04
16	GO:0004008: copper-exporting ATPase activity	3.19E-04
17	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	3.19E-04
18	GO:0051996: squalene synthase activity	3.19E-04
19	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	3.19E-04
20	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.19E-04
21	GO:0004830: tryptophan-tRNA ligase activity	3.19E-04
22	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	3.19E-04
23	GO:0003879: ATP phosphoribosyltransferase activity	3.19E-04
24	GO:0042834: peptidoglycan binding	3.19E-04
25	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	3.19E-04
26	GO:0004813: alanine-tRNA ligase activity	3.19E-04
27	GO:0005290: L-histidine transmembrane transporter activity	3.19E-04
28	GO:0004829: threonine-tRNA ligase activity	6.97E-04
29	GO:0000064: L-ornithine transmembrane transporter activity	6.97E-04
30	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	6.97E-04
31	GO:0005366: myo-inositol:proton symporter activity	6.97E-04
32	GO:0050017: L-3-cyanoalanine synthase activity	6.97E-04
33	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	6.97E-04
34	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	6.97E-04
35	GO:0004557: alpha-galactosidase activity	1.13E-03
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.13E-03
37	GO:0016805: dipeptidase activity	1.13E-03
38	GO:0052692: raffinose alpha-galactosidase activity	1.13E-03
39	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	1.13E-03
40	GO:0045548: phenylalanine ammonia-lyase activity	1.13E-03
41	GO:0003913: DNA photolyase activity	1.13E-03
42	GO:0015181: arginine transmembrane transporter activity	1.62E-03
43	GO:0016149: translation release factor activity, codon specific	1.62E-03
44	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.62E-03
45	GO:0009882: blue light photoreceptor activity	1.62E-03
46	GO:0004300: enoyl-CoA hydratase activity	1.62E-03
47	GO:0015189: L-lysine transmembrane transporter activity	1.62E-03
48	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.62E-03
49	GO:0010011: auxin binding	2.18E-03
50	GO:0010328: auxin influx transmembrane transporter activity	2.18E-03
51	GO:0070628: proteasome binding	2.18E-03
52	GO:0003785: actin monomer binding	2.78E-03
53	GO:0005471: ATP:ADP antiporter activity	2.78E-03
54	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.78E-03
55	GO:2001070: starch binding	3.43E-03
56	GO:0004332: fructose-bisphosphate aldolase activity	3.43E-03
57	GO:0031593: polyubiquitin binding	3.43E-03
58	GO:0004518: nuclease activity	4.06E-03
59	GO:0004656: procollagen-proline 4-dioxygenase activity	4.13E-03
60	GO:0004124: cysteine synthase activity	4.13E-03
61	GO:0004427: inorganic diphosphatase activity	4.87E-03
62	GO:0009881: photoreceptor activity	4.87E-03
63	GO:0043022: ribosome binding	5.66E-03
64	GO:0008312: 7S RNA binding	5.66E-03
65	GO:0016829: lyase activity	6.11E-03
66	GO:0005375: copper ion transmembrane transporter activity	6.49E-03
67	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	6.49E-03
68	GO:0003723: RNA binding	6.88E-03
69	GO:0003747: translation release factor activity	7.36E-03
70	GO:0071949: FAD binding	7.36E-03
71	GO:0005096: GTPase activator activity	7.55E-03
72	GO:0046872: metal ion binding	7.67E-03
73	GO:0030955: potassium ion binding	8.27E-03
74	GO:0004743: pyruvate kinase activity	8.27E-03
75	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	9.08E-03
76	GO:0004805: trehalose-phosphatase activity	9.22E-03
77	GO:0004519: endonuclease activity	9.30E-03
78	GO:0004161: dimethylallyltranstransferase activity	1.02E-02
79	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.02E-02
80	GO:0000049: tRNA binding	1.12E-02
81	GO:0008081: phosphoric diester hydrolase activity	1.23E-02
82	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.23E-02
83	GO:0003725: double-stranded RNA binding	1.23E-02
84	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.57E-02
85	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.57E-02
86	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.57E-02
87	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.59E-02
88	GO:0031418: L-ascorbic acid binding	1.69E-02
89	GO:0043130: ubiquitin binding	1.69E-02
90	GO:0003727: single-stranded RNA binding	2.33E-02
91	GO:0004812: aminoacyl-tRNA ligase activity	2.47E-02
92	GO:0004871: signal transducer activity	2.54E-02
93	GO:0008536: Ran GTPase binding	2.75E-02
94	GO:0019843: rRNA binding	2.84E-02
95	GO:0050662: coenzyme binding	2.90E-02
96	GO:0010181: FMN binding	2.90E-02
97	GO:0005355: glucose transmembrane transporter activity	2.90E-02
98	GO:0019901: protein kinase binding	3.05E-02
99	GO:0003924: GTPase activity	3.11E-02
100	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.20E-02
101	GO:0015144: carbohydrate transmembrane transporter activity	3.40E-02
102	GO:0000156: phosphorelay response regulator activity	3.51E-02
103	GO:0051015: actin filament binding	3.51E-02
104	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.65E-02
105	GO:0003684: damaged DNA binding	3.67E-02
106	GO:0008237: metallopeptidase activity	3.83E-02
107	GO:0005351: sugar:proton symporter activity	3.83E-02
108	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.83E-02
109	GO:0016597: amino acid binding	3.99E-02
110	GO:0005525: GTP binding	4.03E-02
111	GO:0015250: water channel activity	4.16E-02
112	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.67E-02
113	GO:0008236: serine-type peptidase activity	4.84E-02
114	GO:0042802: identical protein binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.01E-12
2	GO:0031225: anchored component of membrane	3.11E-04
3	GO:0046658: anchored component of plasma membrane	5.36E-04
4	GO:0080085: signal recognition particle, chloroplast targeting	6.97E-04
5	GO:0009570: chloroplast stroma	7.20E-04
6	GO:0009574: preprophase band	1.01E-03
7	GO:0016605: PML body	1.13E-03
8	GO:0009535: chloroplast thylakoid membrane	1.47E-03
9	GO:0032432: actin filament bundle	1.62E-03
10	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.18E-03
11	GO:0009505: plant-type cell wall	3.21E-03
12	GO:0031209: SCAR complex	3.43E-03
13	GO:0005655: nucleolar ribonuclease P complex	4.13E-03
14	GO:0009986: cell surface	4.87E-03
15	GO:0042807: central vacuole	4.87E-03
16	GO:0030529: intracellular ribonucleoprotein complex	5.50E-03
17	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	6.49E-03
18	GO:0000326: protein storage vacuole	6.49E-03
19	GO:0016604: nuclear body	8.27E-03
20	GO:0009705: plant-type vacuole membrane	8.33E-03
21	GO:0005884: actin filament	1.02E-02
22	GO:0000311: plastid large ribosomal subunit	1.12E-02
23	GO:0005938: cell cortex	1.23E-02
24	GO:0005578: proteinaceous extracellular matrix	1.23E-02
25	GO:0030176: integral component of endoplasmic reticulum membrane	1.45E-02
26	GO:0042651: thylakoid membrane	1.81E-02
27	GO:0031969: chloroplast membrane	1.91E-02
28	GO:0009532: plastid stroma	1.94E-02
29	GO:0015629: actin cytoskeleton	2.20E-02
30	GO:0005770: late endosome	2.75E-02
31	GO:0005773: vacuole	2.98E-02
32	GO:0009295: nucleoid	3.83E-02
33	GO:0005886: plasma membrane	4.74E-02