GO Enrichment Analysis of Co-expressed Genes with
AT5G04810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 6 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 7 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 8 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 9 | GO:0009853: photorespiration | 4.46E-08 |
| 10 | GO:0009704: de-etiolation | 3.06E-05 |
| 11 | GO:0010362: negative regulation of anion channel activity by blue light | 6.74E-05 |
| 12 | GO:0043971: histone H3-K18 acetylation | 6.74E-05 |
| 13 | GO:0071277: cellular response to calcium ion | 6.74E-05 |
| 14 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.74E-05 |
| 15 | GO:0070509: calcium ion import | 6.74E-05 |
| 16 | GO:0007263: nitric oxide mediated signal transduction | 6.74E-05 |
| 17 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 6.74E-05 |
| 18 | GO:0097054: L-glutamate biosynthetic process | 1.62E-04 |
| 19 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.62E-04 |
| 20 | GO:0080005: photosystem stoichiometry adjustment | 1.62E-04 |
| 21 | GO:0045910: negative regulation of DNA recombination | 2.75E-04 |
| 22 | GO:0000913: preprophase band assembly | 2.75E-04 |
| 23 | GO:0031022: nuclear migration along microfilament | 2.75E-04 |
| 24 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.98E-04 |
| 25 | GO:0009152: purine ribonucleotide biosynthetic process | 3.98E-04 |
| 26 | GO:0046653: tetrahydrofolate metabolic process | 3.98E-04 |
| 27 | GO:0016556: mRNA modification | 3.98E-04 |
| 28 | GO:0006537: glutamate biosynthetic process | 3.98E-04 |
| 29 | GO:0019676: ammonia assimilation cycle | 5.32E-04 |
| 30 | GO:0009902: chloroplast relocation | 5.32E-04 |
| 31 | GO:0009247: glycolipid biosynthetic process | 6.73E-04 |
| 32 | GO:0009904: chloroplast accumulation movement | 6.73E-04 |
| 33 | GO:0042549: photosystem II stabilization | 8.23E-04 |
| 34 | GO:0018298: protein-chromophore linkage | 8.66E-04 |
| 35 | GO:0009854: oxidative photosynthetic carbon pathway | 9.79E-04 |
| 36 | GO:0042026: protein refolding | 9.79E-04 |
| 37 | GO:0006458: 'de novo' protein folding | 9.79E-04 |
| 38 | GO:0009903: chloroplast avoidance movement | 9.79E-04 |
| 39 | GO:0009645: response to low light intensity stimulus | 1.14E-03 |
| 40 | GO:0019375: galactolipid biosynthetic process | 1.32E-03 |
| 41 | GO:0017004: cytochrome complex assembly | 1.50E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 1.50E-03 |
| 43 | GO:0009657: plastid organization | 1.50E-03 |
| 44 | GO:0044030: regulation of DNA methylation | 1.50E-03 |
| 45 | GO:0006098: pentose-phosphate shunt | 1.69E-03 |
| 46 | GO:0009821: alkaloid biosynthetic process | 1.69E-03 |
| 47 | GO:0090333: regulation of stomatal closure | 1.69E-03 |
| 48 | GO:0000373: Group II intron splicing | 1.69E-03 |
| 49 | GO:0009638: phototropism | 1.89E-03 |
| 50 | GO:1900865: chloroplast RNA modification | 1.89E-03 |
| 51 | GO:0045036: protein targeting to chloroplast | 2.10E-03 |
| 52 | GO:0006298: mismatch repair | 2.10E-03 |
| 53 | GO:0009773: photosynthetic electron transport in photosystem I | 2.31E-03 |
| 54 | GO:0006415: translational termination | 2.31E-03 |
| 55 | GO:0006094: gluconeogenesis | 2.76E-03 |
| 56 | GO:0009767: photosynthetic electron transport chain | 2.76E-03 |
| 57 | GO:0006541: glutamine metabolic process | 2.99E-03 |
| 58 | GO:0010207: photosystem II assembly | 2.99E-03 |
| 59 | GO:0090351: seedling development | 3.23E-03 |
| 60 | GO:0080188: RNA-directed DNA methylation | 3.23E-03 |
| 61 | GO:0009058: biosynthetic process | 3.43E-03 |
| 62 | GO:0006810: transport | 3.74E-03 |
| 63 | GO:0016575: histone deacetylation | 3.99E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.99E-03 |
| 65 | GO:0061077: chaperone-mediated protein folding | 4.26E-03 |
| 66 | GO:0080092: regulation of pollen tube growth | 4.53E-03 |
| 67 | GO:0006730: one-carbon metabolic process | 4.53E-03 |
| 68 | GO:0016226: iron-sulfur cluster assembly | 4.53E-03 |
| 69 | GO:0009451: RNA modification | 4.58E-03 |
| 70 | GO:0010118: stomatal movement | 5.68E-03 |
| 71 | GO:0042631: cellular response to water deprivation | 5.68E-03 |
| 72 | GO:0042391: regulation of membrane potential | 5.68E-03 |
| 73 | GO:0007018: microtubule-based movement | 6.28E-03 |
| 74 | GO:0006814: sodium ion transport | 6.28E-03 |
| 75 | GO:0009791: post-embryonic development | 6.60E-03 |
| 76 | GO:0009658: chloroplast organization | 6.91E-03 |
| 77 | GO:0080156: mitochondrial mRNA modification | 6.91E-03 |
| 78 | GO:0016032: viral process | 7.24E-03 |
| 79 | GO:0071805: potassium ion transmembrane transport | 8.24E-03 |
| 80 | GO:0000910: cytokinesis | 8.59E-03 |
| 81 | GO:0001666: response to hypoxia | 8.93E-03 |
| 82 | GO:0010027: thylakoid membrane organization | 8.93E-03 |
| 83 | GO:0046777: protein autophosphorylation | 9.17E-03 |
| 84 | GO:0009816: defense response to bacterium, incompatible interaction | 9.29E-03 |
| 85 | GO:0000160: phosphorelay signal transduction system | 1.11E-02 |
| 86 | GO:0032259: methylation | 1.21E-02 |
| 87 | GO:0009637: response to blue light | 1.27E-02 |
| 88 | GO:0009744: response to sucrose | 1.52E-02 |
| 89 | GO:0009644: response to high light intensity | 1.61E-02 |
| 90 | GO:0006364: rRNA processing | 1.88E-02 |
| 91 | GO:0006813: potassium ion transport | 1.88E-02 |
| 92 | GO:0006417: regulation of translation | 2.02E-02 |
| 93 | GO:0009735: response to cytokinin | 2.06E-02 |
| 94 | GO:0006096: glycolytic process | 2.12E-02 |
| 95 | GO:0009626: plant-type hypersensitive response | 2.22E-02 |
| 96 | GO:0006396: RNA processing | 2.47E-02 |
| 97 | GO:0006457: protein folding | 2.92E-02 |
| 98 | GO:0009790: embryo development | 3.17E-02 |
| 99 | GO:0007623: circadian rhythm | 3.57E-02 |
| 100 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.68E-02 |
| 101 | GO:0010468: regulation of gene expression | 4.04E-02 |
| 102 | GO:0042254: ribosome biogenesis | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 8 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 9 | GO:0004033: aldo-keto reductase (NADP) activity | 3.06E-05 |
| 10 | GO:0004519: endonuclease activity | 3.61E-05 |
| 11 | GO:0016041: glutamate synthase (ferredoxin) activity | 6.74E-05 |
| 12 | GO:0030941: chloroplast targeting sequence binding | 6.74E-05 |
| 13 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 6.74E-05 |
| 14 | GO:0003867: 4-aminobutyrate transaminase activity | 6.74E-05 |
| 15 | GO:0070006: metalloaminopeptidase activity | 6.74E-05 |
| 16 | GO:0008242: omega peptidase activity | 6.74E-05 |
| 17 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.62E-04 |
| 18 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.62E-04 |
| 19 | GO:0034722: gamma-glutamyl-peptidase activity | 1.62E-04 |
| 20 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.75E-04 |
| 21 | GO:0070402: NADPH binding | 2.75E-04 |
| 22 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.75E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 3.98E-04 |
| 24 | GO:0008508: bile acid:sodium symporter activity | 3.98E-04 |
| 25 | GO:0035250: UDP-galactosyltransferase activity | 3.98E-04 |
| 26 | GO:0048487: beta-tubulin binding | 3.98E-04 |
| 27 | GO:0016149: translation release factor activity, codon specific | 3.98E-04 |
| 28 | GO:0051861: glycolipid binding | 5.32E-04 |
| 29 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.32E-04 |
| 30 | GO:0008453: alanine-glyoxylate transaminase activity | 5.32E-04 |
| 31 | GO:0010385: double-stranded methylated DNA binding | 5.32E-04 |
| 32 | GO:0051538: 3 iron, 4 sulfur cluster binding | 6.73E-04 |
| 33 | GO:0030983: mismatched DNA binding | 8.23E-04 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 8.23E-04 |
| 35 | GO:0005242: inward rectifier potassium channel activity | 9.79E-04 |
| 36 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.79E-04 |
| 37 | GO:0005261: cation channel activity | 9.79E-04 |
| 38 | GO:0043022: ribosome binding | 1.32E-03 |
| 39 | GO:0003723: RNA binding | 1.41E-03 |
| 40 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.50E-03 |
| 41 | GO:0003747: translation release factor activity | 1.69E-03 |
| 42 | GO:0016844: strictosidine synthase activity | 1.89E-03 |
| 43 | GO:0004177: aminopeptidase activity | 2.31E-03 |
| 44 | GO:0044183: protein binding involved in protein folding | 2.31E-03 |
| 45 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.31E-03 |
| 46 | GO:0051082: unfolded protein binding | 2.61E-03 |
| 47 | GO:0031072: heat shock protein binding | 2.76E-03 |
| 48 | GO:0000155: phosphorelay sensor kinase activity | 2.76E-03 |
| 49 | GO:0005262: calcium channel activity | 2.76E-03 |
| 50 | GO:0008266: poly(U) RNA binding | 2.99E-03 |
| 51 | GO:0030552: cAMP binding | 3.23E-03 |
| 52 | GO:0030553: cGMP binding | 3.23E-03 |
| 53 | GO:0031409: pigment binding | 3.48E-03 |
| 54 | GO:0051536: iron-sulfur cluster binding | 3.73E-03 |
| 55 | GO:0004407: histone deacetylase activity | 3.73E-03 |
| 56 | GO:0005216: ion channel activity | 3.99E-03 |
| 57 | GO:0015079: potassium ion transmembrane transporter activity | 3.99E-03 |
| 58 | GO:0003756: protein disulfide isomerase activity | 5.09E-03 |
| 59 | GO:0004402: histone acetyltransferase activity | 5.68E-03 |
| 60 | GO:0030551: cyclic nucleotide binding | 5.68E-03 |
| 61 | GO:0010181: FMN binding | 6.28E-03 |
| 62 | GO:0008168: methyltransferase activity | 6.65E-03 |
| 63 | GO:0048038: quinone binding | 6.91E-03 |
| 64 | GO:0003684: damaged DNA binding | 7.90E-03 |
| 65 | GO:0016168: chlorophyll binding | 9.29E-03 |
| 66 | GO:0004222: metalloendopeptidase activity | 1.15E-02 |
| 67 | GO:0042393: histone binding | 1.39E-02 |
| 68 | GO:0043621: protein self-association | 1.61E-02 |
| 69 | GO:0005198: structural molecule activity | 1.65E-02 |
| 70 | GO:0051287: NAD binding | 1.74E-02 |
| 71 | GO:0016887: ATPase activity | 1.97E-02 |
| 72 | GO:0003777: microtubule motor activity | 2.02E-02 |
| 73 | GO:0016874: ligase activity | 2.31E-02 |
| 74 | GO:0008017: microtubule binding | 3.68E-02 |
| 75 | GO:0008194: UDP-glycosyltransferase activity | 3.86E-02 |
| 76 | GO:0042802: identical protein binding | 4.23E-02 |
| 77 | GO:0016788: hydrolase activity, acting on ester bonds | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.93E-22 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.28E-07 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 9.13E-07 |
| 5 | GO:0009570: chloroplast stroma | 1.13E-06 |
| 6 | GO:0009534: chloroplast thylakoid | 1.16E-06 |
| 7 | GO:0009941: chloroplast envelope | 1.68E-05 |
| 8 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.74E-05 |
| 9 | GO:0009782: photosystem I antenna complex | 6.74E-05 |
| 10 | GO:0010287: plastoglobule | 3.38E-04 |
| 11 | GO:0031359: integral component of chloroplast outer membrane | 1.14E-03 |
| 12 | GO:0016324: apical plasma membrane | 2.10E-03 |
| 13 | GO:0009706: chloroplast inner membrane | 2.61E-03 |
| 14 | GO:0009508: plastid chromosome | 2.76E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 2.99E-03 |
| 16 | GO:0030076: light-harvesting complex | 3.23E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 3.25E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 3.99E-03 |
| 19 | GO:0005759: mitochondrial matrix | 4.08E-03 |
| 20 | GO:0005871: kinesin complex | 5.38E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 6.60E-03 |
| 22 | GO:0009504: cell plate | 6.60E-03 |
| 23 | GO:0005694: chromosome | 7.24E-03 |
| 24 | GO:0009295: nucleoid | 8.24E-03 |
| 25 | GO:0030529: intracellular ribonucleoprotein complex | 8.93E-03 |
| 26 | GO:0009707: chloroplast outer membrane | 1.08E-02 |
| 27 | GO:0009536: plastid | 1.31E-02 |
| 28 | GO:0005819: spindle | 1.35E-02 |
| 29 | GO:0043231: intracellular membrane-bounded organelle | 1.40E-02 |
| 30 | GO:0016020: membrane | 1.59E-02 |
| 31 | GO:0005777: peroxisome | 2.59E-02 |
| 32 | GO:0009579: thylakoid | 2.70E-02 |
| 33 | GO:0005623: cell | 2.89E-02 |
| 34 | GO:0009524: phragmoplast | 2.94E-02 |