Gene: OS04G0684500
Gene description
RAP-DB: OS04G0684500
Short description: Pentatricopeptide repeat domain containing protein.
GO biological process
unknown
GO cellular component
unknown
GO molecular function
nucleotide binding (GO:0000166), nucleic acid binding (GO:0003676), binding (GO:0005488)
Protein domain
| Pfam | PF12854, PPR repeat |
| Pfam | PF01535, PPR repeat |
| Pfam | PF13041, PPR repeat family |
| Pfam | PF13812, Pentatricopeptide repeat domain |
| Pfam | PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
| Pfam | PF17177, Pentacotripeptide-repeat region of PROPR |
| SMART | SM00360, RRM |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Coexpression network
Differentially expressed condition 
16 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE19844 | Nipponbare, Mock 24 h | Nipponbare, X. oryzae pv. Oryzae stain bBAI3 24 h | -1.53 | 1.19E-02 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain PXO86 | -1.80 | 4.91E-05 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain _PXO99A | -2.44 | 7.68E-08 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain PXO99AME1 | -1.58 | 1.77E-04 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain PXO99AME5 | -2.57 | 2.81E-08 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain PXO99A_2 | -2.05 | 2.18E-06 |
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain T7174 | -1.72 | 1.22E-04 |
| GSE36272 | Nipponbare, MOCK | Nipponbare, Xanthomonas oryzae strain _PXO99A | -1.65 | 2.27E-04 |
| GSE36272 | Nipponbare, MOCK | Nipponbare, Xanthomonas oryzae strain PXO99AME5 | -1.57 | 3.18E-04 |
| GSE36272 | Nipponbare, MOCK | Nipponbare, Xanthomonas oryzae strain T7174 | -1.92 | 9.83E-06 |
| GSE62894 | Nipponbare, pish, water 5 d | Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d | -6.96 | 3.08E-11 |
| GSE62895 | Nipponbare, Pia, water 3 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d | -2.70 | 1.13E-02 |
| GSE62895 | Nipponbare, Pia, water 5 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d | -2.33 | 3.68E-02 |
| GSE62895 | Nipponbare, pia, water 5 d | Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d | -2.09 | 4.87E-02 |
| GSE63047 | Nipponbare, water 7 d | Nipponbare, Xanthomonas oryzae T7174R 7 d | -3.38 | 5.79E-16 |
| GSE7256 | Nipponbare, Mock 4 d | Nipponbare, Magnaporthe grisea FR13 5 d | -1.97 | 4.09E-03 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.