Gene: AT4G38430
     

Gene description


TAIR ID: AT4G38430

Short description: rho guanyl-nucleotide exchange factor 1

Pathogen responsiveness: 0.60

General responsiveness: -1.37

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G158679  

Wheat:

TAAFFX.37823.1.A1_AT  


GO biological process


regulation of pollen tube growth, pollen tube growth


GO cellular component


nucleus, cytosol, apical plasma membrane


GO molecular function


protein binding, Rho guanyl-nucleotide exchange factor activity


Protein domain


PfamPF03759, PRONE (Plant-specific Rop nucleotide exchanger)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


40 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h-1.641.84E-03
GSE12856Col, WT, controlCol, WT, Bg h-1.769.32E-07
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.932.91E-07
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.975.02E-04
GSE17464Laer, controlLaer, Flg22 1 h-1.611.22E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.386.62E-06
GSE17464Penta, controlPenta, Flg22 2 h-1.901.41E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.631.10E-06
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.917.41E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.942.58E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.867.48E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.651.58E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.278.97E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.671.38E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.523.75E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.401.75E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.374.33E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.131.71E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.511.78E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.253.24E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.687.05E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.124.79E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.563.30E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.522.13E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.624.02E-16
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.632.88E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.268.85E-13
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.521.10E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.212.50E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.341.12E-13
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.576.94E-07
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.849.58E-09
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.532.23E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.011.21E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.904.92E-09
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.779.76E-09
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.602.17E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.641.27E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.654.58E-08
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.557.12E-03






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