co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G38430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009249: protein lipoylation	0.00E+00
2	GO:0044154: histone H3-K14 acetylation	0.00E+00
3	GO:0009106: lipoate metabolic process	0.00E+00
4	GO:0006114: glycerol biosynthetic process	0.00E+00
5	GO:0046460: neutral lipid biosynthetic process	0.00E+00
6	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
7	GO:0043972: histone H3-K23 acetylation	0.00E+00
8	GO:0042547: cell wall modification involved in multidimensional cell growth	9.69E-05
9	GO:0006436: tryptophanyl-tRNA aminoacylation	9.69E-05
10	GO:0000066: mitochondrial ornithine transport	9.69E-05
11	GO:0051171: regulation of nitrogen compound metabolic process	9.69E-05
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	9.69E-05
13	GO:0043971: histone H3-K18 acetylation	9.69E-05
14	GO:0048657: anther wall tapetum cell differentiation	9.69E-05
15	GO:0010207: photosystem II assembly	2.19E-04
16	GO:0006435: threonyl-tRNA aminoacylation	2.28E-04
17	GO:0043255: regulation of carbohydrate biosynthetic process	2.28E-04
18	GO:0080005: photosystem stoichiometry adjustment	2.28E-04
19	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	2.28E-04
20	GO:0009825: multidimensional cell growth	2.48E-04
21	GO:0001578: microtubule bundle formation	3.80E-04
22	GO:0006508: proteolysis	5.43E-04
23	GO:0006166: purine ribonucleoside salvage	5.46E-04
24	GO:0010306: rhamnogalacturonan II biosynthetic process	5.46E-04
25	GO:0010255: glucose mediated signaling pathway	5.46E-04
26	GO:0006168: adenine salvage	5.46E-04
27	GO:0051322: anaphase	7.26E-04
28	GO:0006552: leucine catabolic process	7.26E-04
29	GO:0007020: microtubule nucleation	7.26E-04
30	GO:0015846: polyamine transport	7.26E-04
31	GO:0031365: N-terminal protein amino acid modification	9.17E-04
32	GO:0009107: lipoate biosynthetic process	9.17E-04
33	GO:0044209: AMP salvage	9.17E-04
34	GO:0046785: microtubule polymerization	9.17E-04
35	GO:0010337: regulation of salicylic acid metabolic process	1.12E-03
36	GO:0034389: lipid particle organization	1.34E-03
37	GO:0048528: post-embryonic root development	1.57E-03
38	GO:0022904: respiratory electron transport chain	1.57E-03
39	GO:0009658: chloroplast organization	1.71E-03
40	GO:0009704: de-etiolation	1.81E-03
41	GO:0045010: actin nucleation	1.81E-03
42	GO:0007155: cell adhesion	1.81E-03
43	GO:0048564: photosystem I assembly	1.81E-03
44	GO:0044030: regulation of DNA methylation	2.07E-03
45	GO:0022900: electron transport chain	2.07E-03
46	GO:0019432: triglyceride biosynthetic process	2.33E-03
47	GO:0009821: alkaloid biosynthetic process	2.33E-03
48	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.33E-03
49	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.61E-03
50	GO:0010380: regulation of chlorophyll biosynthetic process	2.61E-03
51	GO:0010192: mucilage biosynthetic process	2.90E-03
52	GO:0006032: chitin catabolic process	2.90E-03
53	GO:0045037: protein import into chloroplast stroma	3.50E-03
54	GO:0009767: photosynthetic electron transport chain	3.82E-03
55	GO:0090351: seedling development	4.49E-03
56	GO:0010053: root epidermal cell differentiation	4.49E-03
57	GO:0080188: RNA-directed DNA methylation	4.49E-03
58	GO:0010167: response to nitrate	4.49E-03
59	GO:0006071: glycerol metabolic process	4.83E-03
60	GO:0006289: nucleotide-excision repair	5.19E-03
61	GO:0010187: negative regulation of seed germination	5.19E-03
62	GO:0010073: meristem maintenance	5.55E-03
63	GO:0006825: copper ion transport	5.55E-03
64	GO:0006418: tRNA aminoacylation for protein translation	5.55E-03
65	GO:0043622: cortical microtubule organization	5.55E-03
66	GO:0016998: cell wall macromolecule catabolic process	5.93E-03
67	GO:0048511: rhythmic process	5.93E-03
68	GO:0006730: one-carbon metabolic process	6.31E-03
69	GO:0009814: defense response, incompatible interaction	6.31E-03
70	GO:0016226: iron-sulfur cluster assembly	6.31E-03
71	GO:0010584: pollen exine formation	7.10E-03
72	GO:0010197: polar nucleus fusion	8.35E-03
73	GO:0048868: pollen tube development	8.35E-03
74	GO:0010268: brassinosteroid homeostasis	8.35E-03
75	GO:0010468: regulation of gene expression	8.64E-03
76	GO:0009646: response to absence of light	8.79E-03
77	GO:0016132: brassinosteroid biosynthetic process	9.68E-03
78	GO:0071554: cell wall organization or biogenesis	9.68E-03
79	GO:0007264: small GTPase mediated signal transduction	1.01E-02
80	GO:0071281: cellular response to iron ion	1.06E-02
81	GO:0010090: trichome morphogenesis	1.06E-02
82	GO:0016125: sterol metabolic process	1.11E-02
83	GO:0000910: cytokinesis	1.20E-02
84	GO:0016126: sterol biosynthetic process	1.25E-02
85	GO:0009911: positive regulation of flower development	1.25E-02
86	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.44E-02
87	GO:0016311: dephosphorylation	1.46E-02
88	GO:0046777: protein autophosphorylation	1.49E-02
89	GO:0048481: plant ovule development	1.51E-02
90	GO:0030244: cellulose biosynthetic process	1.51E-02
91	GO:0009793: embryo development ending in seed dormancy	1.56E-02
92	GO:0009910: negative regulation of flower development	1.68E-02
93	GO:0009853: photorespiration	1.79E-02
94	GO:0006839: mitochondrial transport	1.96E-02
95	GO:0008283: cell proliferation	2.14E-02
96	GO:0006812: cation transport	2.52E-02
97	GO:0009664: plant-type cell wall organization	2.52E-02
98	GO:0009809: lignin biosynthetic process	2.65E-02
99	GO:0009873: ethylene-activated signaling pathway	2.66E-02
100	GO:0051603: proteolysis involved in cellular protein catabolic process	2.72E-02
101	GO:0010224: response to UV-B	2.72E-02
102	GO:0006417: regulation of translation	2.85E-02
103	GO:0006096: glycolytic process	2.99E-02
104	GO:0009740: gibberellic acid mediated signaling pathway	3.26E-02
105	GO:0009058: biosynthetic process	4.15E-02
106	GO:0042744: hydrogen peroxide catabolic process	4.38E-02
107	GO:0009790: embryo development	4.46E-02
108	GO:0040008: regulation of growth	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
3	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
4	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
5	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
6	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
7	GO:0019808: polyamine binding	0.00E+00
8	GO:0048039: ubiquinone binding	0.00E+00
9	GO:0004830: tryptophan-tRNA ligase activity	9.69E-05
10	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	9.69E-05
11	GO:0005290: L-histidine transmembrane transporter activity	9.69E-05
12	GO:0004008: copper-exporting ATPase activity	9.69E-05
13	GO:0017118: lipoyltransferase activity	2.28E-04
14	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	2.28E-04
15	GO:0016415: octanoyltransferase activity	2.28E-04
16	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.28E-04
17	GO:0000064: L-ornithine transmembrane transporter activity	2.28E-04
18	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.28E-04
19	GO:0004829: threonine-tRNA ligase activity	2.28E-04
20	GO:0004176: ATP-dependent peptidase activity	3.74E-04
21	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	3.80E-04
22	GO:0016805: dipeptidase activity	3.80E-04
23	GO:0008430: selenium binding	3.80E-04
24	GO:0032947: protein complex scaffold	3.80E-04
25	GO:0032549: ribonucleoside binding	3.80E-04
26	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.80E-04
27	GO:0015189: L-lysine transmembrane transporter activity	5.46E-04
28	GO:0000254: C-4 methylsterol oxidase activity	5.46E-04
29	GO:0015181: arginine transmembrane transporter activity	5.46E-04
30	GO:0003999: adenine phosphoribosyltransferase activity	5.46E-04
31	GO:0046872: metal ion binding	6.47E-04
32	GO:0010385: double-stranded methylated DNA binding	7.26E-04
33	GO:0070628: proteasome binding	7.26E-04
34	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	9.17E-04
35	GO:0031593: polyubiquitin binding	1.12E-03
36	GO:0030247: polysaccharide binding	1.24E-03
37	GO:0009927: histidine phosphotransfer kinase activity	1.34E-03
38	GO:0004144: diacylglycerol O-acyltransferase activity	1.34E-03
39	GO:0008235: metalloexopeptidase activity	1.57E-03
40	GO:0015491: cation:cation antiporter activity	1.81E-03
41	GO:0005375: copper ion transmembrane transporter activity	2.07E-03
42	GO:0051537: 2 iron, 2 sulfur cluster binding	2.39E-03
43	GO:0016844: strictosidine synthase activity	2.61E-03
44	GO:0004568: chitinase activity	2.90E-03
45	GO:0001054: RNA polymerase I activity	3.20E-03
46	GO:0004177: aminopeptidase activity	3.20E-03
47	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.82E-03
48	GO:0005506: iron ion binding	4.27E-03
49	GO:0051536: iron-sulfur cluster binding	5.19E-03
50	GO:0043130: ubiquitin binding	5.19E-03
51	GO:0030570: pectate lyase activity	6.70E-03
52	GO:0004812: aminoacyl-tRNA ligase activity	7.51E-03
53	GO:0004402: histone acetyltransferase activity	7.93E-03
54	GO:0008080: N-acetyltransferase activity	8.35E-03
55	GO:0001085: RNA polymerase II transcription factor binding	8.35E-03
56	GO:0048038: quinone binding	9.68E-03
57	GO:0004518: nuclease activity	1.01E-02
58	GO:0003684: damaged DNA binding	1.11E-02
59	GO:0008237: metallopeptidase activity	1.16E-02
60	GO:0016413: O-acetyltransferase activity	1.20E-02
61	GO:0008233: peptidase activity	1.37E-02
62	GO:0052689: carboxylic ester hydrolase activity	1.54E-02
63	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.68E-02
64	GO:0003993: acid phosphatase activity	1.85E-02
65	GO:0042393: histone binding	1.96E-02
66	GO:0051539: 4 iron, 4 sulfur cluster binding	1.96E-02
67	GO:0004185: serine-type carboxypeptidase activity	2.14E-02
68	GO:0009055: electron carrier activity	2.21E-02
69	GO:0005198: structural molecule activity	2.33E-02
70	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.65E-02
71	GO:0016757: transferase activity, transferring glycosyl groups	2.76E-02
72	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.07E-02
73	GO:0016829: lyase activity	4.23E-02
74	GO:0004252: serine-type endopeptidase activity	4.30E-02
75	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.38E-02
76	GO:0008565: protein transporter activity	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0042597: periplasmic space	0.00E+00
3	GO:0009507: chloroplast	1.31E-05
4	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	9.69E-05
5	GO:0009897: external side of plasma membrane	3.80E-04
6	GO:0072686: mitotic spindle	9.17E-04
7	GO:0031209: SCAR complex	1.12E-03
8	GO:0010005: cortical microtubule, transverse to long axis	1.34E-03
9	GO:0031305: integral component of mitochondrial inner membrane	1.81E-03
10	GO:0005811: lipid particle	2.07E-03
11	GO:0005736: DNA-directed RNA polymerase I complex	2.33E-03
12	GO:0005856: cytoskeleton	2.48E-03
13	GO:0055028: cortical microtubule	2.90E-03
14	GO:0005740: mitochondrial envelope	2.90E-03
15	GO:0005938: cell cortex	3.82E-03
16	GO:0009574: preprophase band	3.82E-03
17	GO:0009535: chloroplast thylakoid membrane	4.05E-03
18	GO:0009536: plastid	5.97E-03
19	GO:0046658: anchored component of plasma membrane	9.59E-03
20	GO:0005667: transcription factor complex	1.36E-02
21	GO:0005802: trans-Golgi network	1.39E-02
22	GO:0009707: chloroplast outer membrane	1.51E-02
23	GO:0005768: endosome	1.63E-02
24	GO:0005819: spindle	1.91E-02
25	GO:0009570: chloroplast stroma	2.58E-02
26	GO:0005789: endoplasmic reticulum membrane	3.17E-02
27	GO:0009706: chloroplast inner membrane	3.41E-02
28	GO:0005623: cell	4.07E-02
29	GO:0009524: phragmoplast	4.15E-02
30	GO:0005759: mitochondrial matrix	4.70E-02