co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G38430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0045014: negative regulation of transcription by glucose	0.00E+00
7	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
8	GO:1902183: regulation of shoot apical meristem development	1.12E-05
9	GO:0010158: abaxial cell fate specification	1.12E-05
10	GO:0071805: potassium ion transmembrane transport	4.51E-05
11	GO:2000024: regulation of leaf development	6.88E-05
12	GO:0000373: Group II intron splicing	6.88E-05
13	GO:0048507: meristem development	6.88E-05
14	GO:0010480: microsporocyte differentiation	8.43E-05
15	GO:0031338: regulation of vesicle fusion	8.43E-05
16	GO:0043609: regulation of carbon utilization	8.43E-05
17	GO:0010450: inflorescence meristem growth	8.43E-05
18	GO:0080148: negative regulation of response to water deprivation	2.00E-04
19	GO:0009944: polarity specification of adaxial/abaxial axis	2.55E-04
20	GO:0006421: asparaginyl-tRNA aminoacylation	3.35E-04
21	GO:0043617: cellular response to sucrose starvation	3.35E-04
22	GO:0090630: activation of GTPase activity	3.35E-04
23	GO:0045165: cell fate commitment	3.35E-04
24	GO:0006000: fructose metabolic process	3.35E-04
25	GO:0006629: lipid metabolic process	4.78E-04
26	GO:0010305: leaf vascular tissue pattern formation	5.10E-04
27	GO:0010154: fruit development	5.10E-04
28	GO:0006085: acetyl-CoA biosynthetic process	6.44E-04
29	GO:0042549: photosystem II stabilization	9.94E-04
30	GO:0009942: longitudinal axis specification	1.18E-03
31	GO:0010067: procambium histogenesis	1.18E-03
32	GO:0009910: negative regulation of flower development	1.32E-03
33	GO:1900056: negative regulation of leaf senescence	1.39E-03
34	GO:0048437: floral organ development	1.39E-03
35	GO:0009850: auxin metabolic process	1.60E-03
36	GO:0009690: cytokinin metabolic process	1.60E-03
37	GO:0010093: specification of floral organ identity	1.83E-03
38	GO:0006002: fructose 6-phosphate metabolic process	1.83E-03
39	GO:0034765: regulation of ion transmembrane transport	2.06E-03
40	GO:0048589: developmental growth	2.06E-03
41	GO:0006098: pentose-phosphate shunt	2.06E-03
42	GO:0006779: porphyrin-containing compound biosynthetic process	2.30E-03
43	GO:0010380: regulation of chlorophyll biosynthetic process	2.30E-03
44	GO:0006813: potassium ion transport	2.47E-03
45	GO:0006782: protoporphyrinogen IX biosynthetic process	2.56E-03
46	GO:0006468: protein phosphorylation	2.69E-03
47	GO:0048229: gametophyte development	2.82E-03
48	GO:0048364: root development	3.06E-03
49	GO:0010152: pollen maturation	3.09E-03
50	GO:0010075: regulation of meristem growth	3.37E-03
51	GO:0006094: gluconeogenesis	3.37E-03
52	GO:0010223: secondary shoot formation	3.66E-03
53	GO:0009934: regulation of meristem structural organization	3.66E-03
54	GO:0048768: root hair cell tip growth	3.66E-03
55	GO:0009933: meristem structural organization	3.66E-03
56	GO:0006289: nucleotide-excision repair	4.57E-03
57	GO:0009790: embryo development	5.09E-03
58	GO:0001944: vasculature development	5.89E-03
59	GO:0009686: gibberellin biosynthetic process	5.89E-03
60	GO:0010089: xylem development	6.24E-03
61	GO:0048443: stamen development	6.24E-03
62	GO:0042391: regulation of membrane potential	6.97E-03
63	GO:0010051: xylem and phloem pattern formation	6.97E-03
64	GO:0048653: anther development	6.97E-03
65	GO:0010268: brassinosteroid homeostasis	7.34E-03
66	GO:0009646: response to absence of light	7.72E-03
67	GO:0016132: brassinosteroid biosynthetic process	8.50E-03
68	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.50E-03
69	GO:0071554: cell wall organization or biogenesis	8.50E-03
70	GO:0016032: viral process	8.90E-03
71	GO:0009658: chloroplast organization	9.31E-03
72	GO:0016125: sterol metabolic process	9.72E-03
73	GO:0006904: vesicle docking involved in exocytosis	1.01E-02
74	GO:0001666: response to hypoxia	1.10E-02
75	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.20E-02
76	GO:0015995: chlorophyll biosynthetic process	1.23E-02
77	GO:0048481: plant ovule development	1.33E-02
78	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
79	GO:0006499: N-terminal protein myristoylation	1.42E-02
80	GO:0006811: ion transport	1.42E-02
81	GO:0009853: photorespiration	1.57E-02
82	GO:0006839: mitochondrial transport	1.72E-02
83	GO:0006887: exocytosis	1.77E-02
84	GO:0006397: mRNA processing	1.78E-02
85	GO:0009640: photomorphogenesis	1.88E-02
86	GO:0009744: response to sucrose	1.88E-02
87	GO:0006364: rRNA processing	2.32E-02
88	GO:0051603: proteolysis involved in cellular protein catabolic process	2.38E-02
89	GO:0005975: carbohydrate metabolic process	2.49E-02
90	GO:0009909: regulation of flower development	2.50E-02
91	GO:0006096: glycolytic process	2.62E-02
92	GO:0009908: flower development	2.75E-02
93	GO:0009620: response to fungus	2.80E-02
94	GO:0042545: cell wall modification	2.92E-02
95	GO:0009416: response to light stimulus	3.04E-02
96	GO:0051301: cell division	3.31E-02
97	GO:0007275: multicellular organism development	3.43E-02
98	GO:0006633: fatty acid biosynthetic process	4.12E-02
99	GO:0007623: circadian rhythm	4.40E-02
100	GO:0045490: pectin catabolic process	4.40E-02
101	GO:0009451: RNA modification	4.47E-02
102	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.77E-02
103	GO:0007166: cell surface receptor signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
2	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
3	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
4	GO:1990534: thermospermine oxidase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
7	GO:0051777: ent-kaurenoate oxidase activity	8.43E-05
8	GO:0004856: xylulokinase activity	8.43E-05
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.43E-05
10	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	8.43E-05
11	GO:0008081: phosphoric diester hydrolase activity	1.58E-04
12	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.00E-04
13	GO:0015079: potassium ion transmembrane transporter activity	2.83E-04
14	GO:0004816: asparagine-tRNA ligase activity	3.35E-04
15	GO:0016805: dipeptidase activity	3.35E-04
16	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	3.35E-04
17	GO:0004180: carboxypeptidase activity	3.35E-04
18	GO:0004148: dihydrolipoyl dehydrogenase activity	3.35E-04
19	GO:0003878: ATP citrate synthase activity	4.84E-04
20	GO:0070628: proteasome binding	6.44E-04
21	GO:0010011: auxin binding	6.44E-04
22	GO:0008453: alanine-glyoxylate transaminase activity	6.44E-04
23	GO:0016773: phosphotransferase activity, alcohol group as acceptor	8.14E-04
24	GO:0017137: Rab GTPase binding	8.14E-04
25	GO:0042578: phosphoric ester hydrolase activity	9.94E-04
26	GO:0031593: polyubiquitin binding	9.94E-04
27	GO:2001070: starch binding	9.94E-04
28	GO:0004332: fructose-bisphosphate aldolase activity	9.94E-04
29	GO:0004674: protein serine/threonine kinase activity	1.01E-03
30	GO:0005242: inward rectifier potassium channel activity	1.18E-03
31	GO:0043022: ribosome binding	1.60E-03
32	GO:0004033: aldo-keto reductase (NADP) activity	1.60E-03
33	GO:0016301: kinase activity	1.89E-03
34	GO:0004565: beta-galactosidase activity	3.37E-03
35	GO:0008131: primary amine oxidase activity	3.66E-03
36	GO:0043130: ubiquitin binding	4.57E-03
37	GO:0005528: FK506 binding	4.57E-03
38	GO:0005524: ATP binding	5.01E-03
39	GO:0033612: receptor serine/threonine kinase binding	5.22E-03
40	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.22E-03
41	GO:0005249: voltage-gated potassium channel activity	6.97E-03
42	GO:0030551: cyclic nucleotide binding	6.97E-03
43	GO:0042802: identical protein binding	7.64E-03
44	GO:0004518: nuclease activity	8.90E-03
45	GO:0003684: damaged DNA binding	9.72E-03
46	GO:0016413: O-acetyltransferase activity	1.06E-02
47	GO:0005515: protein binding	1.24E-02
48	GO:0005096: GTPase activator activity	1.37E-02
49	GO:0050897: cobalt ion binding	1.47E-02
50	GO:0004185: serine-type carboxypeptidase activity	1.88E-02
51	GO:0035091: phosphatidylinositol binding	1.99E-02
52	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.10E-02
53	GO:0016298: lipase activity	2.38E-02
54	GO:0045330: aspartyl esterase activity	2.50E-02
55	GO:0003777: microtubule motor activity	2.50E-02
56	GO:0003723: RNA binding	2.52E-02
57	GO:0030599: pectinesterase activity	2.86E-02
58	GO:0016829: lyase activity	3.70E-02
59	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.19E-02
60	GO:0005507: copper ion binding	4.31E-02
61	GO:0008017: microtubule binding	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009346: citrate lyase complex	4.84E-04
3	GO:0030529: intracellular ribonucleoprotein complex	8.91E-04
4	GO:0005886: plasma membrane	1.19E-03
5	GO:0009507: chloroplast	2.90E-03
6	GO:0030659: cytoplasmic vesicle membrane	3.66E-03
7	GO:0009532: plastid stroma	5.22E-03
8	GO:0005759: mitochondrial matrix	5.48E-03
9	GO:0000145: exocyst	8.90E-03
10	GO:0009570: chloroplast stroma	1.88E-02
11	GO:0005789: endoplasmic reticulum membrane	2.51E-02
12	GO:0005747: mitochondrial respiratory chain complex I	2.68E-02
13	GO:0012505: endomembrane system	2.92E-02
14	GO:0009543: chloroplast thylakoid lumen	3.50E-02