Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G38430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0009249: protein lipoylation0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0090470: shoot organ boundary specification0.00E+00
6GO:0090279: regulation of calcium ion import0.00E+00
7GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
8GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
9GO:0009106: lipoate metabolic process0.00E+00
10GO:0006114: glycerol biosynthetic process0.00E+00
11GO:0071474: cellular hyperosmotic response0.00E+00
12GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
13GO:0015995: chlorophyll biosynthetic process7.98E-08
14GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.14E-07
15GO:0055114: oxidation-reduction process3.54E-06
16GO:0010207: photosystem II assembly1.01E-05
17GO:0071482: cellular response to light stimulus4.11E-05
18GO:2001141: regulation of RNA biosynthetic process8.23E-05
19GO:0009658: chloroplast organization1.27E-04
20GO:0045038: protein import into chloroplast thylakoid membrane2.19E-04
21GO:0010027: thylakoid membrane organization2.34E-04
22GO:0015979: photosynthesis3.04E-04
23GO:0042549: photosystem II stabilization3.08E-04
24GO:0048363: mucilage pectin metabolic process5.09E-04
25GO:0010362: negative regulation of anion channel activity by blue light5.09E-04
26GO:0015969: guanosine tetraphosphate metabolic process5.09E-04
27GO:1902478: negative regulation of defense response to bacterium, incompatible interaction5.09E-04
28GO:0015671: oxygen transport5.09E-04
29GO:1904966: positive regulation of vitamin E biosynthetic process5.09E-04
30GO:0010426: DNA methylation on cytosine within a CHH sequence5.09E-04
31GO:0000481: maturation of 5S rRNA5.09E-04
32GO:0015801: aromatic amino acid transport5.09E-04
33GO:1904964: positive regulation of phytol biosynthetic process5.09E-04
34GO:0043686: co-translational protein modification5.09E-04
35GO:0043087: regulation of GTPase activity5.09E-04
36GO:0071461: cellular response to redox state5.09E-04
37GO:1902458: positive regulation of stomatal opening5.09E-04
38GO:0009395: phospholipid catabolic process5.29E-04
39GO:0016559: peroxisome fission6.59E-04
40GO:0048564: photosystem I assembly6.59E-04
41GO:0006729: tetrahydrobiopterin biosynthetic process1.10E-03
42GO:1903426: regulation of reactive oxygen species biosynthetic process1.10E-03
43GO:0051262: protein tetramerization1.10E-03
44GO:0010275: NAD(P)H dehydrogenase complex assembly1.10E-03
45GO:0035304: regulation of protein dephosphorylation1.10E-03
46GO:0080005: photosystem stoichiometry adjustment1.10E-03
47GO:1902326: positive regulation of chlorophyll biosynthetic process1.10E-03
48GO:0000256: allantoin catabolic process1.10E-03
49GO:0006435: threonyl-tRNA aminoacylation1.10E-03
50GO:0071668: plant-type cell wall assembly1.10E-03
51GO:0080183: response to photooxidative stress1.10E-03
52GO:0010155: regulation of proton transport1.10E-03
53GO:0019684: photosynthesis, light reaction1.52E-03
54GO:0009089: lysine biosynthetic process via diaminopimelate1.52E-03
55GO:0009773: photosynthetic electron transport in photosystem I1.52E-03
56GO:0006352: DNA-templated transcription, initiation1.52E-03
57GO:0016024: CDP-diacylglycerol biosynthetic process1.74E-03
58GO:0010136: ureide catabolic process1.79E-03
59GO:0034051: negative regulation of plant-type hypersensitive response1.79E-03
60GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.79E-03
61GO:0044375: regulation of peroxisome size1.79E-03
62GO:0005977: glycogen metabolic process1.79E-03
63GO:0046621: negative regulation of organ growth1.79E-03
64GO:0006094: gluconeogenesis1.98E-03
65GO:0009102: biotin biosynthetic process2.60E-03
66GO:0009152: purine ribonucleotide biosynthetic process2.60E-03
67GO:0046653: tetrahydrofolate metabolic process2.60E-03
68GO:0009052: pentose-phosphate shunt, non-oxidative branch2.60E-03
69GO:0033014: tetrapyrrole biosynthetic process2.60E-03
70GO:0006145: purine nucleobase catabolic process2.60E-03
71GO:0006424: glutamyl-tRNA aminoacylation2.60E-03
72GO:1901332: negative regulation of lateral root development2.60E-03
73GO:0010371: regulation of gibberellin biosynthetic process2.60E-03
74GO:0006810: transport3.08E-03
75GO:0009765: photosynthesis, light harvesting3.50E-03
76GO:0010021: amylopectin biosynthetic process3.50E-03
77GO:0006631: fatty acid metabolic process3.98E-03
78GO:0044550: secondary metabolite biosynthetic process4.11E-03
79GO:0016123: xanthophyll biosynthetic process4.49E-03
80GO:0006465: signal peptide processing4.49E-03
81GO:0000304: response to singlet oxygen4.49E-03
82GO:0080110: sporopollenin biosynthetic process4.49E-03
83GO:0046907: intracellular transport4.49E-03
84GO:0032543: mitochondrial translation4.49E-03
85GO:0016120: carotene biosynthetic process4.49E-03
86GO:0006564: L-serine biosynthetic process4.49E-03
87GO:0009904: chloroplast accumulation movement4.49E-03
88GO:0031365: N-terminal protein amino acid modification4.49E-03
89GO:0009107: lipoate biosynthetic process4.49E-03
90GO:0009735: response to cytokinin5.22E-03
91GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.56E-03
92GO:0006655: phosphatidylglycerol biosynthetic process5.56E-03
93GO:0010190: cytochrome b6f complex assembly5.56E-03
94GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.56E-03
95GO:1901259: chloroplast rRNA processing6.71E-03
96GO:0009903: chloroplast avoidance movement6.71E-03
97GO:0030488: tRNA methylation6.71E-03
98GO:0048437: floral organ development7.95E-03
99GO:0006614: SRP-dependent cotranslational protein targeting to membrane7.95E-03
100GO:0006400: tRNA modification7.95E-03
101GO:0006096: glycolytic process8.01E-03
102GO:0007155: cell adhesion9.25E-03
103GO:0006605: protein targeting9.25E-03
104GO:0042255: ribosome assembly9.25E-03
105GO:0032508: DNA duplex unwinding9.25E-03
106GO:0006353: DNA-templated transcription, termination9.25E-03
107GO:2000070: regulation of response to water deprivation9.25E-03
108GO:0022900: electron transport chain1.06E-02
109GO:0015996: chlorophyll catabolic process1.06E-02
110GO:0007186: G-protein coupled receptor signaling pathway1.06E-02
111GO:0006526: arginine biosynthetic process1.06E-02
112GO:0032544: plastid translation1.06E-02
113GO:0017004: cytochrome complex assembly1.06E-02
114GO:0009821: alkaloid biosynthetic process1.21E-02
115GO:0051865: protein autoubiquitination1.21E-02
116GO:0090305: nucleic acid phosphodiester bond hydrolysis1.21E-02
117GO:0006098: pentose-phosphate shunt1.21E-02
118GO:0010206: photosystem II repair1.21E-02
119GO:0019432: triglyceride biosynthetic process1.21E-02
120GO:0006783: heme biosynthetic process1.21E-02
121GO:0010205: photoinhibition1.36E-02
122GO:0009638: phototropism1.36E-02
123GO:0006779: porphyrin-containing compound biosynthetic process1.36E-02
124GO:0048354: mucilage biosynthetic process involved in seed coat development1.36E-02
125GO:0016311: dephosphorylation1.39E-02
126GO:0009817: defense response to fungus, incompatible interaction1.46E-02
127GO:0018298: protein-chromophore linkage1.46E-02
128GO:0006535: cysteine biosynthetic process from serine1.52E-02
129GO:0043069: negative regulation of programmed cell death1.52E-02
130GO:0008285: negative regulation of cell proliferation1.68E-02
131GO:0007568: aging1.69E-02
132GO:0006633: fatty acid biosynthetic process1.81E-02
133GO:0045037: protein import into chloroplast stroma1.85E-02
134GO:0009725: response to hormone2.03E-02
135GO:0009767: photosynthetic electron transport chain2.03E-02
136GO:0009785: blue light signaling pathway2.03E-02
137GO:0009718: anthocyanin-containing compound biosynthetic process2.03E-02
138GO:0009266: response to temperature stimulus2.21E-02
139GO:0034605: cellular response to heat2.21E-02
140GO:0010143: cutin biosynthetic process2.21E-02
141GO:0010020: chloroplast fission2.21E-02
142GO:0032259: methylation2.22E-02
143GO:0007031: peroxisome organization2.40E-02
144GO:0042343: indole glucosinolate metabolic process2.40E-02
145GO:0006636: unsaturated fatty acid biosynthetic process2.59E-02
146GO:0019344: cysteine biosynthetic process2.79E-02
147GO:0006289: nucleotide-excision repair2.79E-02
148GO:0008299: isoprenoid biosynthetic process2.99E-02
149GO:0006418: tRNA aminoacylation for protein translation2.99E-02
150GO:0007017: microtubule-based process2.99E-02
151GO:0010073: meristem maintenance2.99E-02
152GO:0048511: rhythmic process3.20E-02
153GO:0098542: defense response to other organism3.20E-02
154GO:0010431: seed maturation3.20E-02
155GO:0061077: chaperone-mediated protein folding3.20E-02
156GO:0006306: DNA methylation3.20E-02
157GO:0031408: oxylipin biosynthetic process3.20E-02
158GO:0003333: amino acid transmembrane transport3.20E-02
159GO:0016998: cell wall macromolecule catabolic process3.20E-02
160GO:0016226: iron-sulfur cluster assembly3.42E-02
161GO:0010227: floral organ abscission3.64E-02
162GO:0043086: negative regulation of catalytic activity3.81E-02
163GO:0010584: pollen exine formation3.86E-02
164GO:0019722: calcium-mediated signaling3.86E-02
165GO:0009306: protein secretion3.86E-02
166GO:0016117: carotenoid biosynthetic process4.08E-02
167GO:0051028: mRNA transport4.08E-02
168GO:0042335: cuticle development4.32E-02
169GO:0000271: polysaccharide biosynthetic process4.32E-02
170GO:0009741: response to brassinosteroid4.55E-02
171GO:0006520: cellular amino acid metabolic process4.55E-02
172GO:0045489: pectin biosynthetic process4.55E-02
173GO:0010182: sugar mediated signaling pathway4.55E-02
RankGO TermAdjusted P value
1GO:0036033: mediator complex binding0.00E+00
2GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
3GO:0005048: signal sequence binding0.00E+00
4GO:0004076: biotin synthase activity0.00E+00
5GO:0043136: glycerol-3-phosphatase activity0.00E+00
6GO:0000121: glycerol-1-phosphatase activity0.00E+00
7GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
8GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
9GO:0019144: ADP-sugar diphosphatase activity0.00E+00
10GO:0050613: delta14-sterol reductase activity0.00E+00
11GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
12GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
13GO:0045435: lycopene epsilon cyclase activity0.00E+00
14GO:0004822: isoleucine-tRNA ligase activity0.00E+00
15GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
16GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
17GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
18GO:0016851: magnesium chelatase activity6.14E-07
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.76E-06
20GO:0016491: oxidoreductase activity4.17E-06
21GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.14E-05
22GO:0070402: NADPH binding3.85E-05
23GO:0048038: quinone binding1.22E-04
24GO:0001053: plastid sigma factor activity1.43E-04
25GO:0016987: sigma factor activity1.43E-04
26GO:0031072: heat shock protein binding1.74E-04
27GO:0008266: poly(U) RNA binding2.08E-04
28GO:0004332: fructose-bisphosphate aldolase activity3.08E-04
29GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.08E-04
30GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity5.09E-04
31GO:0005227: calcium activated cation channel activity5.09E-04
32GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity5.09E-04
33GO:0004856: xylulokinase activity5.09E-04
34GO:0009496: plastoquinol--plastocyanin reductase activity5.09E-04
35GO:0080042: ADP-glucose pyrophosphohydrolase activity5.09E-04
36GO:0080132: fatty acid alpha-hydroxylase activity5.09E-04
37GO:0010242: oxygen evolving activity5.09E-04
38GO:0004325: ferrochelatase activity5.09E-04
39GO:0005080: protein kinase C binding5.09E-04
40GO:0042586: peptide deformylase activity5.09E-04
41GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity5.09E-04
42GO:0005344: oxygen transporter activity5.09E-04
43GO:0003993: acid phosphatase activity5.68E-04
44GO:0019843: rRNA binding6.36E-04
45GO:0003755: peptidyl-prolyl cis-trans isomerase activity9.90E-04
46GO:0004617: phosphoglycerate dehydrogenase activity1.10E-03
47GO:0016415: octanoyltransferase activity1.10E-03
48GO:0015173: aromatic amino acid transmembrane transporter activity1.10E-03
49GO:0018708: thiol S-methyltransferase activity1.10E-03
50GO:0004829: threonine-tRNA ligase activity1.10E-03
51GO:0019156: isoamylase activity1.10E-03
52GO:0008728: GTP diphosphokinase activity1.10E-03
53GO:0050017: L-3-cyanoalanine synthase activity1.10E-03
54GO:0017118: lipoyltransferase activity1.10E-03
55GO:0042389: omega-3 fatty acid desaturase activity1.10E-03
56GO:0080041: ADP-ribose pyrophosphohydrolase activity1.10E-03
57GO:0004180: carboxypeptidase activity1.79E-03
58GO:0005504: fatty acid binding1.79E-03
59GO:0002161: aminoacyl-tRNA editing activity1.79E-03
60GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.79E-03
61GO:0004751: ribose-5-phosphate isomerase activity1.79E-03
62GO:0030267: glyoxylate reductase (NADP) activity1.79E-03
63GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.79E-03
64GO:0008864: formyltetrahydrofolate deformylase activity1.79E-03
65GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.79E-03
66GO:0005525: GTP binding1.99E-03
67GO:0016788: hydrolase activity, acting on ester bonds2.51E-03
68GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.60E-03
69GO:0009882: blue light photoreceptor activity2.60E-03
70GO:0043023: ribosomal large subunit binding2.60E-03
71GO:0005528: FK506 binding3.10E-03
72GO:0003746: translation elongation factor activity3.19E-03
73GO:0070628: proteasome binding3.50E-03
74GO:0045430: chalcone isomerase activity3.50E-03
75GO:0043495: protein anchor3.50E-03
76GO:0005275: amine transmembrane transporter activity4.49E-03
77GO:0016773: phosphotransferase activity, alcohol group as acceptor4.49E-03
78GO:0051537: 2 iron, 2 sulfur cluster binding4.88E-03
79GO:0031593: polyubiquitin binding5.56E-03
80GO:0004556: alpha-amylase activity5.56E-03
81GO:0000293: ferric-chelate reductase activity5.56E-03
82GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity5.56E-03
83GO:0004124: cysteine synthase activity6.71E-03
84GO:0051920: peroxiredoxin activity6.71E-03
85GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.71E-03
86GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.71E-03
87GO:0005261: cation channel activity6.71E-03
88GO:0003886: DNA (cytosine-5-)-methyltransferase activity6.71E-03
89GO:0003924: GTPase activity7.03E-03
90GO:0042802: identical protein binding7.04E-03
91GO:0005509: calcium ion binding7.64E-03
92GO:0019899: enzyme binding7.95E-03
93GO:0003729: mRNA binding8.33E-03
94GO:0016209: antioxidant activity9.25E-03
95GO:0008312: 7S RNA binding9.25E-03
96GO:0051082: unfolded protein binding1.02E-02
97GO:0008135: translation factor activity, RNA binding1.06E-02
98GO:0008173: RNA methyltransferase activity1.06E-02
99GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.06E-02
100GO:0071949: FAD binding1.21E-02
101GO:0004743: pyruvate kinase activity1.36E-02
102GO:0030955: potassium ion binding1.36E-02
103GO:0016844: strictosidine synthase activity1.36E-02
104GO:0008236: serine-type peptidase activity1.39E-02
105GO:0004222: metalloendopeptidase activity1.61E-02
106GO:0000049: tRNA binding1.85E-02
107GO:0016787: hydrolase activity1.92E-02
108GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.94E-02
109GO:0004565: beta-galactosidase activity2.03E-02
110GO:0000155: phosphorelay sensor kinase activity2.03E-02
111GO:0031624: ubiquitin conjugating enzyme binding2.21E-02
112GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.21E-02
113GO:0003723: RNA binding2.48E-02
114GO:0035091: phosphatidylinositol binding2.59E-02
115GO:0016740: transferase activity2.66E-02
116GO:0004857: enzyme inhibitor activity2.79E-02
117GO:0043130: ubiquitin binding2.79E-02
118GO:0051536: iron-sulfur cluster binding2.79E-02
119GO:0051287: NAD binding2.90E-02
120GO:0004176: ATP-dependent peptidase activity3.20E-02
121GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.23E-02
122GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.42E-02
123GO:0004601: peroxidase activity3.52E-02
124GO:0022891: substrate-specific transmembrane transporter activity3.64E-02
125GO:0030570: pectate lyase activity3.64E-02
126GO:0003735: structural constituent of ribosome3.79E-02
127GO:0003756: protein disulfide isomerase activity3.86E-02
128GO:0003727: single-stranded RNA binding3.86E-02
129GO:0004812: aminoacyl-tRNA ligase activity4.08E-02
130GO:0008080: N-acetyltransferase activity4.55E-02
131GO:0016853: isomerase activity4.79E-02
132GO:0050662: coenzyme binding4.79E-02
133GO:0010181: FMN binding4.79E-02
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Gene type



Gene DE type