Gene: AT4G30620
     


Gene description


TAIR ID: AT4G30620

Short description: Uncharacterised BCR, YbaB family COG0718

Pathogen responsiveness: -0.59

General responsiveness: -0.05

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


chloroplast, chloroplast stroma, chloroplast envelope


GO molecular function


protein binding, DNA binding


Protein domain


PfamPF02575, YbaB/EbfC DNA-binding family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT5G11260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-1.623.47E-05
GSE17464Penta, controlPenta, Flg22 2 h-1.537.05E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.533.50E-03
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.877.12E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.698.69E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.471.33E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.082.23E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.752.18E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.713.41E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.839.73E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.596.61E-14






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