Gene: AT2G28950
     

Gene description


TAIR ID: AT2G28950

Short description: expansin A6

Pathogen responsiveness: 1.31

General responsiveness: 1.13

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


plant-type cell wall loosening, syncytium formation, plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall organization


GO cellular component


extracellular region, membrane, plant-type cell wall


GO molecular function


unkown


Protein domain


PfamPF03330, Lytic transglycolase
PfamPF01357, Pollen allergen
SMARTSM00837, DPBB_1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


50 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h-1.574.72E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.617.72E-05
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.911.36E-05
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.852.49E-03
GSE17464Laer, controlLaer, Flg22 1 h-1.743.67E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.672.02E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.862.07E-03
GSE17464Penta, controlPenta, PstDC3000 12 h2.483.82E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-3.681.36E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-4.311.72E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-3.451.82E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.699.25E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.014.91E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.742.52E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.974.31E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.762.94E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.232.49E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.684.61E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.719.63E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.641.88E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.503.49E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.804.48E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.276.44E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.461.67E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.071.16E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.535.50E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.951.85E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.136.51E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.742.13E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.267.16E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.905.18E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.316.63E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.994.12E-15
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.021.15E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.501.97E-11
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.038.02E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.952.65E-14
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.741.05E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.183.15E-16
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.784.60E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.862.72E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.723.94E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.081.65E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.842.25E-08
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.884.95E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.516.82E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.631.68E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.251.30E-06
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-1.504.26E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.141.41E-02






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