Gene: AT1G53520
     


Gene description


TAIR ID: AT1G53520

Short description: Chalcone-flavanone isomerase family protein

Pathogen responsiveness: 0.34

General responsiveness: 0.70

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G311919  

Wheat:

TA.22426.1.S1_AT  TA.22426.1.S1_X_AT  


GO biological process


fatty acid metabolic process


GO cellular component


chloroplast stroma, chloroplast


GO molecular function


intramolecular lyase activity


Protein domain


PfamPF02431, Chalcone-flavanone isomerase

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.156.77E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.705.09E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.106.37E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.911.60E-09
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-1.682.10E-02
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-1.841.10E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-3.038.17E-07
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.761.56E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.712.51E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-2.215.58E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.811.78E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.032.46E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.027.38E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.304.07E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.653.77E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.843.94E-10
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-4.611.07E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.595.10E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.371.22E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.382.94E-03
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h-1.515.41E-05
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h-1.922.47E-06
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h-1.768.07E-06
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.372.39E-05






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