GO Enrichment Analysis of Co-expressed Genes with
AT1G53520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 4 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0009735: response to cytokinin | 5.62E-06 |
| 7 | GO:0043489: RNA stabilization | 2.76E-05 |
| 8 | GO:0044262: cellular carbohydrate metabolic process | 2.76E-05 |
| 9 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.83E-04 |
| 10 | GO:0010731: protein glutathionylation | 1.83E-04 |
| 11 | GO:0006424: glutamyl-tRNA aminoacylation | 1.83E-04 |
| 12 | GO:2000122: negative regulation of stomatal complex development | 2.48E-04 |
| 13 | GO:0010037: response to carbon dioxide | 2.48E-04 |
| 14 | GO:0015976: carbon utilization | 2.48E-04 |
| 15 | GO:0045727: positive regulation of translation | 2.48E-04 |
| 16 | GO:0032543: mitochondrial translation | 3.18E-04 |
| 17 | GO:0006461: protein complex assembly | 3.18E-04 |
| 18 | GO:0009913: epidermal cell differentiation | 3.92E-04 |
| 19 | GO:0000470: maturation of LSU-rRNA | 3.92E-04 |
| 20 | GO:0005978: glycogen biosynthetic process | 6.32E-04 |
| 21 | GO:0032544: plastid translation | 7.18E-04 |
| 22 | GO:0009657: plastid organization | 7.18E-04 |
| 23 | GO:0010206: photosystem II repair | 8.07E-04 |
| 24 | GO:0006783: heme biosynthetic process | 8.07E-04 |
| 25 | GO:0006412: translation | 9.57E-04 |
| 26 | GO:0006782: protoporphyrinogen IX biosynthetic process | 9.92E-04 |
| 27 | GO:0010102: lateral root morphogenesis | 1.29E-03 |
| 28 | GO:0006289: nucleotide-excision repair | 1.73E-03 |
| 29 | GO:0009686: gibberellin biosynthetic process | 2.22E-03 |
| 30 | GO:0042254: ribosome biogenesis | 2.26E-03 |
| 31 | GO:0006284: base-excision repair | 2.35E-03 |
| 32 | GO:0048825: cotyledon development | 3.02E-03 |
| 33 | GO:0019252: starch biosynthetic process | 3.02E-03 |
| 34 | GO:0015979: photosynthesis | 3.12E-03 |
| 35 | GO:0000302: response to reactive oxygen species | 3.16E-03 |
| 36 | GO:0009409: response to cold | 3.41E-03 |
| 37 | GO:0030163: protein catabolic process | 3.45E-03 |
| 38 | GO:0008152: metabolic process | 4.44E-03 |
| 39 | GO:0015995: chlorophyll biosynthetic process | 4.54E-03 |
| 40 | GO:0009817: defense response to fungus, incompatible interaction | 4.87E-03 |
| 41 | GO:0010119: regulation of stomatal movement | 5.38E-03 |
| 42 | GO:0009631: cold acclimation | 5.38E-03 |
| 43 | GO:0045087: innate immune response | 5.73E-03 |
| 44 | GO:0034599: cellular response to oxidative stress | 5.91E-03 |
| 45 | GO:0006364: rRNA processing | 8.40E-03 |
| 46 | GO:0009740: gibberellic acid mediated signaling pathway | 1.03E-02 |
| 47 | GO:0009624: response to nematode | 1.07E-02 |
| 48 | GO:0006396: RNA processing | 1.10E-02 |
| 49 | GO:0009845: seed germination | 1.33E-02 |
| 50 | GO:0042744: hydrogen peroxide catabolic process | 1.38E-02 |
| 51 | GO:0006979: response to oxidative stress | 1.46E-02 |
| 52 | GO:0009451: RNA modification | 1.61E-02 |
| 53 | GO:0015031: protein transport | 1.84E-02 |
| 54 | GO:0009658: chloroplast organization | 2.16E-02 |
| 55 | GO:0005975: carbohydrate metabolic process | 2.20E-02 |
| 56 | GO:0046686: response to cadmium ion | 2.26E-02 |
| 57 | GO:0032259: methylation | 3.22E-02 |
| 58 | GO:0006281: DNA repair | 3.32E-02 |
| 59 | GO:0009793: embryo development ending in seed dormancy | 3.35E-02 |
| 60 | GO:0006397: mRNA processing | 3.42E-02 |
| 61 | GO:0016310: phosphorylation | 3.55E-02 |
| 62 | GO:0006508: proteolysis | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0019843: rRNA binding | 2.25E-06 |
| 5 | GO:0004856: xylulokinase activity | 2.76E-05 |
| 6 | GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity | 2.76E-05 |
| 7 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.76E-05 |
| 8 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.76E-05 |
| 9 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.76E-05 |
| 10 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.76E-05 |
| 11 | GO:0008266: poly(U) RNA binding | 3.57E-05 |
| 12 | GO:0005528: FK506 binding | 5.28E-05 |
| 13 | GO:0018708: thiol S-methyltransferase activity | 7.01E-05 |
| 14 | GO:0004750: ribulose-phosphate 3-epimerase activity | 7.01E-05 |
| 15 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 1.23E-04 |
| 16 | GO:0030267: glyoxylate reductase (NADP) activity | 1.23E-04 |
| 17 | GO:0003735: structural constituent of ribosome | 1.63E-04 |
| 18 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 2.48E-04 |
| 19 | GO:0019104: DNA N-glycosylase activity | 2.48E-04 |
| 20 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.18E-04 |
| 21 | GO:0004130: cytochrome-c peroxidase activity | 3.92E-04 |
| 22 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.69E-04 |
| 23 | GO:0004602: glutathione peroxidase activity | 4.69E-04 |
| 24 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.37E-04 |
| 25 | GO:0015386: potassium:proton antiporter activity | 1.09E-03 |
| 26 | GO:0004089: carbonate dehydratase activity | 1.29E-03 |
| 27 | GO:0015079: potassium ion transmembrane transporter activity | 1.85E-03 |
| 28 | GO:0050662: coenzyme binding | 2.88E-03 |
| 29 | GO:0048038: quinone binding | 3.16E-03 |
| 30 | GO:0003684: damaged DNA binding | 3.60E-03 |
| 31 | GO:0008237: metallopeptidase activity | 3.75E-03 |
| 32 | GO:0003729: mRNA binding | 3.84E-03 |
| 33 | GO:0008236: serine-type peptidase activity | 4.70E-03 |
| 34 | GO:0004222: metalloendopeptidase activity | 5.21E-03 |
| 35 | GO:0004364: glutathione transferase activity | 6.64E-03 |
| 36 | GO:0004252: serine-type endopeptidase activity | 1.36E-02 |
| 37 | GO:0003824: catalytic activity | 1.59E-02 |
| 38 | GO:0008168: methyltransferase activity | 2.10E-02 |
| 39 | GO:0000287: magnesium ion binding | 2.13E-02 |
| 40 | GO:0004601: peroxidase activity | 2.16E-02 |
| 41 | GO:0003723: RNA binding | 3.12E-02 |
| 42 | GO:0008289: lipid binding | 4.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 6.89E-26 |
| 2 | GO:0009507: chloroplast | 3.85E-20 |
| 3 | GO:0009941: chloroplast envelope | 6.52E-19 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.27E-13 |
| 5 | GO:0009579: thylakoid | 1.21E-11 |
| 6 | GO:0009534: chloroplast thylakoid | 1.76E-08 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.25E-06 |
| 8 | GO:0009533: chloroplast stromal thylakoid | 5.50E-06 |
| 9 | GO:0031977: thylakoid lumen | 1.60E-05 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.76E-05 |
| 11 | GO:0010319: stromule | 1.91E-04 |
| 12 | GO:0005840: ribosome | 3.84E-04 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.07E-04 |
| 14 | GO:0000311: plastid large ribosomal subunit | 1.19E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 1.40E-03 |
| 16 | GO:0015935: small ribosomal subunit | 1.97E-03 |
| 17 | GO:0031969: chloroplast membrane | 2.74E-03 |
| 18 | GO:0009523: photosystem II | 3.02E-03 |
| 19 | GO:0030529: intracellular ribonucleoprotein complex | 4.06E-03 |
| 20 | GO:0009706: chloroplast inner membrane | 1.07E-02 |
| 21 | GO:0048046: apoplast | 1.19E-02 |
| 22 | GO:0010287: plastoglobule | 1.21E-02 |
| 23 | GO:0009536: plastid | 1.77E-02 |
| 24 | GO:0022625: cytosolic large ribosomal subunit | 2.61E-02 |