Gene: AT5G51560
     

Gene description


TAIR ID: AT5G51560

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: 0.03

General responsiveness: -1.27

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway


GO cellular component


plasma membrane


GO molecular function


protein serine/threonine kinase activity


Protein domain


PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF13855, Leucine rich repeat
PfamPF07714, Protein tyrosine kinase

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.876.02E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.972.77E-06
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.601.15E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.911.42E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.628.42E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.092.38E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.986.48E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.212.18E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.938.35E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.803.43E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.389.18E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.871.23E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.223.34E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.242.10E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.428.72E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.281.40E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.035.85E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.879.98E-14
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.436.36E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-2.254.92E-04
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h-1.522.01E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.333.10E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.