GO Enrichment Analysis of Co-expressed Genes with
AT5G51560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006573: valine metabolic process | 0.00E+00 |
| 2 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 6 | GO:0010411: xyloglucan metabolic process | 7.73E-06 |
| 7 | GO:0015976: carbon utilization | 1.44E-05 |
| 8 | GO:0006633: fatty acid biosynthetic process | 1.72E-05 |
| 9 | GO:0042546: cell wall biogenesis | 2.87E-05 |
| 10 | GO:0016117: carotenoid biosynthetic process | 4.32E-05 |
| 11 | GO:0042026: protein refolding | 4.98E-05 |
| 12 | GO:0006458: 'de novo' protein folding | 4.98E-05 |
| 13 | GO:0045489: pectin biosynthetic process | 5.50E-05 |
| 14 | GO:0006438: valyl-tRNA aminoacylation | 1.31E-04 |
| 15 | GO:0000032: cell wall mannoprotein biosynthetic process | 1.31E-04 |
| 16 | GO:0032025: response to cobalt ion | 1.31E-04 |
| 17 | GO:0006169: adenosine salvage | 1.31E-04 |
| 18 | GO:0010442: guard cell morphogenesis | 1.31E-04 |
| 19 | GO:0071370: cellular response to gibberellin stimulus | 1.31E-04 |
| 20 | GO:0010480: microsporocyte differentiation | 1.31E-04 |
| 21 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.31E-04 |
| 22 | GO:0006551: leucine metabolic process | 1.31E-04 |
| 23 | GO:0000066: mitochondrial ornithine transport | 1.31E-04 |
| 24 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 3.03E-04 |
| 25 | GO:2000123: positive regulation of stomatal complex development | 3.03E-04 |
| 26 | GO:0010424: DNA methylation on cytosine within a CG sequence | 3.03E-04 |
| 27 | GO:0043039: tRNA aminoacylation | 3.03E-04 |
| 28 | GO:0052541: plant-type cell wall cellulose metabolic process | 3.03E-04 |
| 29 | GO:0071555: cell wall organization | 4.98E-04 |
| 30 | GO:0006696: ergosterol biosynthetic process | 4.99E-04 |
| 31 | GO:2001295: malonyl-CoA biosynthetic process | 4.99E-04 |
| 32 | GO:0006065: UDP-glucuronate biosynthetic process | 4.99E-04 |
| 33 | GO:0033591: response to L-ascorbic acid | 4.99E-04 |
| 34 | GO:0006418: tRNA aminoacylation for protein translation | 5.12E-04 |
| 35 | GO:0061077: chaperone-mediated protein folding | 5.61E-04 |
| 36 | GO:0007005: mitochondrion organization | 6.13E-04 |
| 37 | GO:0051016: barbed-end actin filament capping | 7.14E-04 |
| 38 | GO:0009298: GDP-mannose biosynthetic process | 7.14E-04 |
| 39 | GO:0000271: polysaccharide biosynthetic process | 8.42E-04 |
| 40 | GO:2000122: negative regulation of stomatal complex development | 9.47E-04 |
| 41 | GO:2000038: regulation of stomatal complex development | 9.47E-04 |
| 42 | GO:0006546: glycine catabolic process | 9.47E-04 |
| 43 | GO:0010037: response to carbon dioxide | 9.47E-04 |
| 44 | GO:0006542: glutamine biosynthetic process | 9.47E-04 |
| 45 | GO:0019676: ammonia assimilation cycle | 9.47E-04 |
| 46 | GO:0009765: photosynthesis, light harvesting | 9.47E-04 |
| 47 | GO:0010583: response to cyclopentenone | 1.18E-03 |
| 48 | GO:0016120: carotene biosynthetic process | 1.20E-03 |
| 49 | GO:0016123: xanthophyll biosynthetic process | 1.20E-03 |
| 50 | GO:0044209: AMP salvage | 1.20E-03 |
| 51 | GO:0010375: stomatal complex patterning | 1.20E-03 |
| 52 | GO:0009635: response to herbicide | 1.47E-03 |
| 53 | GO:0045490: pectin catabolic process | 1.67E-03 |
| 54 | GO:0009612: response to mechanical stimulus | 1.76E-03 |
| 55 | GO:0009082: branched-chain amino acid biosynthetic process | 1.76E-03 |
| 56 | GO:0017148: negative regulation of translation | 1.76E-03 |
| 57 | GO:0009099: valine biosynthetic process | 1.76E-03 |
| 58 | GO:0009554: megasporogenesis | 1.76E-03 |
| 59 | GO:0006826: iron ion transport | 2.06E-03 |
| 60 | GO:0009645: response to low light intensity stimulus | 2.06E-03 |
| 61 | GO:0006880: intracellular sequestering of iron ion | 2.06E-03 |
| 62 | GO:0006955: immune response | 2.06E-03 |
| 63 | GO:0048437: floral organ development | 2.06E-03 |
| 64 | GO:0045010: actin nucleation | 2.39E-03 |
| 65 | GO:0052543: callose deposition in cell wall | 2.39E-03 |
| 66 | GO:0016051: carbohydrate biosynthetic process | 2.59E-03 |
| 67 | GO:0048193: Golgi vesicle transport | 2.73E-03 |
| 68 | GO:0009097: isoleucine biosynthetic process | 2.73E-03 |
| 69 | GO:0009932: cell tip growth | 2.73E-03 |
| 70 | GO:0022900: electron transport chain | 2.73E-03 |
| 71 | GO:0009416: response to light stimulus | 2.83E-03 |
| 72 | GO:0006839: mitochondrial transport | 2.94E-03 |
| 73 | GO:0006754: ATP biosynthetic process | 3.08E-03 |
| 74 | GO:0048589: developmental growth | 3.08E-03 |
| 75 | GO:0006349: regulation of gene expression by genetic imprinting | 3.46E-03 |
| 76 | GO:0009409: response to cold | 3.50E-03 |
| 77 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.84E-03 |
| 78 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.24E-03 |
| 79 | GO:0006879: cellular iron ion homeostasis | 4.24E-03 |
| 80 | GO:0048229: gametophyte development | 4.24E-03 |
| 81 | GO:0010216: maintenance of DNA methylation | 4.24E-03 |
| 82 | GO:0000038: very long-chain fatty acid metabolic process | 4.24E-03 |
| 83 | GO:0046686: response to cadmium ion | 4.48E-03 |
| 84 | GO:0015706: nitrate transport | 4.65E-03 |
| 85 | GO:0030036: actin cytoskeleton organization | 5.08E-03 |
| 86 | GO:0010075: regulation of meristem growth | 5.08E-03 |
| 87 | GO:0010020: chloroplast fission | 5.52E-03 |
| 88 | GO:0009934: regulation of meristem structural organization | 5.52E-03 |
| 89 | GO:0048768: root hair cell tip growth | 5.52E-03 |
| 90 | GO:0010167: response to nitrate | 5.97E-03 |
| 91 | GO:0005985: sucrose metabolic process | 5.97E-03 |
| 92 | GO:0010039: response to iron ion | 5.97E-03 |
| 93 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.43E-03 |
| 94 | GO:0006071: glycerol metabolic process | 6.43E-03 |
| 95 | GO:0007010: cytoskeleton organization | 6.91E-03 |
| 96 | GO:0008152: metabolic process | 7.07E-03 |
| 97 | GO:0010026: trichome differentiation | 7.40E-03 |
| 98 | GO:0016998: cell wall macromolecule catabolic process | 7.91E-03 |
| 99 | GO:0055114: oxidation-reduction process | 8.24E-03 |
| 100 | GO:0009814: defense response, incompatible interaction | 8.42E-03 |
| 101 | GO:0080092: regulation of pollen tube growth | 8.42E-03 |
| 102 | GO:0009793: embryo development ending in seed dormancy | 8.92E-03 |
| 103 | GO:0009294: DNA mediated transformation | 8.95E-03 |
| 104 | GO:0040007: growth | 8.95E-03 |
| 105 | GO:0009790: embryo development | 9.28E-03 |
| 106 | GO:0006284: base-excision repair | 9.49E-03 |
| 107 | GO:0042335: cuticle development | 1.06E-02 |
| 108 | GO:0080022: primary root development | 1.06E-02 |
| 109 | GO:0048653: anther development | 1.06E-02 |
| 110 | GO:0009735: response to cytokinin | 1.16E-02 |
| 111 | GO:0055072: iron ion homeostasis | 1.24E-02 |
| 112 | GO:0000302: response to reactive oxygen species | 1.30E-02 |
| 113 | GO:0016032: viral process | 1.36E-02 |
| 114 | GO:0007267: cell-cell signaling | 1.55E-02 |
| 115 | GO:0005975: carbohydrate metabolic process | 1.55E-02 |
| 116 | GO:0016126: sterol biosynthetic process | 1.68E-02 |
| 117 | GO:0009607: response to biotic stimulus | 1.75E-02 |
| 118 | GO:0042128: nitrate assimilation | 1.82E-02 |
| 119 | GO:0048767: root hair elongation | 2.11E-02 |
| 120 | GO:0080167: response to karrikin | 2.12E-02 |
| 121 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.19E-02 |
| 122 | GO:0010119: regulation of stomatal movement | 2.25E-02 |
| 123 | GO:0010043: response to zinc ion | 2.25E-02 |
| 124 | GO:0007568: aging | 2.25E-02 |
| 125 | GO:0009910: negative regulation of flower development | 2.25E-02 |
| 126 | GO:0009744: response to sucrose | 2.88E-02 |
| 127 | GO:0009414: response to water deprivation | 3.05E-02 |
| 128 | GO:0006486: protein glycosylation | 3.56E-02 |
| 129 | GO:0006857: oligopeptide transport | 3.74E-02 |
| 130 | GO:0048367: shoot system development | 4.11E-02 |
| 131 | GO:0016569: covalent chromatin modification | 4.39E-02 |
| 132 | GO:0009734: auxin-activated signaling pathway | 4.39E-02 |
| 133 | GO:0042545: cell wall modification | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.40E-06 |
| 7 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.73E-06 |
| 8 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.95E-05 |
| 9 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.11E-04 |
| 10 | GO:0004831: tyrosine-tRNA ligase activity | 1.31E-04 |
| 11 | GO:0051996: squalene synthase activity | 1.31E-04 |
| 12 | GO:0010313: phytochrome binding | 1.31E-04 |
| 13 | GO:0004001: adenosine kinase activity | 1.31E-04 |
| 14 | GO:0004476: mannose-6-phosphate isomerase activity | 1.31E-04 |
| 15 | GO:0003984: acetolactate synthase activity | 1.31E-04 |
| 16 | GO:0004832: valine-tRNA ligase activity | 1.31E-04 |
| 17 | GO:0042834: peptidoglycan binding | 1.31E-04 |
| 18 | GO:0044183: protein binding involved in protein folding | 2.24E-04 |
| 19 | GO:0004089: carbonate dehydratase activity | 2.95E-04 |
| 20 | GO:0000064: L-ornithine transmembrane transporter activity | 3.03E-04 |
| 21 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.03E-04 |
| 22 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.03E-04 |
| 23 | GO:0042389: omega-3 fatty acid desaturase activity | 3.03E-04 |
| 24 | GO:0004047: aminomethyltransferase activity | 3.03E-04 |
| 25 | GO:0004312: fatty acid synthase activity | 3.03E-04 |
| 26 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.19E-04 |
| 27 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.19E-04 |
| 28 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.19E-04 |
| 29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.99E-04 |
| 30 | GO:0004075: biotin carboxylase activity | 4.99E-04 |
| 31 | GO:0070402: NADPH binding | 4.99E-04 |
| 32 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 4.99E-04 |
| 33 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.99E-04 |
| 34 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.13E-04 |
| 35 | GO:0030570: pectate lyase activity | 6.66E-04 |
| 36 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.14E-04 |
| 37 | GO:0008199: ferric iron binding | 7.14E-04 |
| 38 | GO:0001872: (1->3)-beta-D-glucan binding | 7.14E-04 |
| 39 | GO:0004322: ferroxidase activity | 7.14E-04 |
| 40 | GO:0048027: mRNA 5'-UTR binding | 7.14E-04 |
| 41 | GO:0004812: aminoacyl-tRNA ligase activity | 7.82E-04 |
| 42 | GO:0016758: transferase activity, transferring hexosyl groups | 1.08E-03 |
| 43 | GO:0005507: copper ion binding | 1.11E-03 |
| 44 | GO:0004518: nuclease activity | 1.18E-03 |
| 45 | GO:0004356: glutamate-ammonia ligase activity | 1.20E-03 |
| 46 | GO:0003989: acetyl-CoA carboxylase activity | 1.20E-03 |
| 47 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.20E-03 |
| 48 | GO:0009922: fatty acid elongase activity | 1.20E-03 |
| 49 | GO:0008200: ion channel inhibitor activity | 1.47E-03 |
| 50 | GO:0016597: amino acid binding | 1.49E-03 |
| 51 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.76E-03 |
| 52 | GO:0005544: calcium-dependent phospholipid binding | 2.39E-03 |
| 53 | GO:0004564: beta-fructofuranosidase activity | 2.39E-03 |
| 54 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.73E-03 |
| 55 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.08E-03 |
| 56 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.08E-03 |
| 57 | GO:0015112: nitrate transmembrane transporter activity | 3.46E-03 |
| 58 | GO:0004575: sucrose alpha-glucosidase activity | 3.46E-03 |
| 59 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.24E-03 |
| 60 | GO:0004565: beta-galactosidase activity | 5.08E-03 |
| 61 | GO:0004650: polygalacturonase activity | 5.80E-03 |
| 62 | GO:0051082: unfolded protein binding | 6.35E-03 |
| 63 | GO:0033612: receptor serine/threonine kinase binding | 7.91E-03 |
| 64 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.91E-03 |
| 65 | GO:0016829: lyase activity | 8.60E-03 |
| 66 | GO:0019901: protein kinase binding | 1.24E-02 |
| 67 | GO:0051015: actin filament binding | 1.42E-02 |
| 68 | GO:0005200: structural constituent of cytoskeleton | 1.55E-02 |
| 69 | GO:0008483: transaminase activity | 1.55E-02 |
| 70 | GO:0030247: polysaccharide binding | 1.89E-02 |
| 71 | GO:0003746: translation elongation factor activity | 2.41E-02 |
| 72 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 73 | GO:0043621: protein self-association | 3.05E-02 |
| 74 | GO:0015293: symporter activity | 3.13E-02 |
| 75 | GO:0051287: NAD binding | 3.30E-02 |
| 76 | GO:0009055: electron carrier activity | 3.35E-02 |
| 77 | GO:0045330: aspartyl esterase activity | 3.83E-02 |
| 78 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.11E-02 |
| 79 | GO:0030599: pectinesterase activity | 4.39E-02 |
| 80 | GO:0022857: transmembrane transporter activity | 4.39E-02 |
| 81 | GO:0003779: actin binding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0031225: anchored component of membrane | 9.53E-16 |
| 3 | GO:0046658: anchored component of plasma membrane | 4.27E-15 |
| 4 | GO:0048046: apoplast | 1.02E-10 |
| 5 | GO:0009941: chloroplast envelope | 5.98E-09 |
| 6 | GO:0009570: chloroplast stroma | 6.45E-09 |
| 7 | GO:0005618: cell wall | 1.84E-08 |
| 8 | GO:0009505: plant-type cell wall | 3.80E-07 |
| 9 | GO:0005886: plasma membrane | 1.80E-05 |
| 10 | GO:0009507: chloroplast | 3.76E-05 |
| 11 | GO:0009506: plasmodesma | 7.37E-05 |
| 12 | GO:0042170: plastid membrane | 3.03E-04 |
| 13 | GO:0005775: vacuolar lumen | 7.14E-04 |
| 14 | GO:0016020: membrane | 8.63E-04 |
| 15 | GO:0010168: ER body | 1.47E-03 |
| 16 | GO:0009986: cell surface | 2.06E-03 |
| 17 | GO:0000325: plant-type vacuole | 2.37E-03 |
| 18 | GO:0005576: extracellular region | 2.65E-03 |
| 19 | GO:0022626: cytosolic ribosome | 2.65E-03 |
| 20 | GO:0000139: Golgi membrane | 3.50E-03 |
| 21 | GO:0009579: thylakoid | 3.72E-03 |
| 22 | GO:0016324: apical plasma membrane | 3.84E-03 |
| 23 | GO:0030659: cytoplasmic vesicle membrane | 5.52E-03 |
| 24 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.97E-03 |
| 25 | GO:0005875: microtubule associated complex | 6.43E-03 |
| 26 | GO:0010319: stromule | 1.55E-02 |
| 27 | GO:0005774: vacuolar membrane | 1.79E-02 |
| 28 | GO:0031969: chloroplast membrane | 2.12E-02 |
| 29 | GO:0031902: late endosome membrane | 2.72E-02 |
| 30 | GO:0031977: thylakoid lumen | 2.72E-02 |
| 31 | GO:0009535: chloroplast thylakoid membrane | 2.76E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 2.91E-02 |
| 33 | GO:0005856: cytoskeleton | 3.13E-02 |
| 34 | GO:0005773: vacuole | 3.66E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 4.58E-02 |
| 36 | GO:0005829: cytosol | 4.78E-02 |