Gene: AT5G38510
     


Gene description


TAIR ID: AT5G38510

Short description: Rhomboid-related intramembrane serine protease family protein

Pathogen responsiveness: -0.04

General responsiveness: 1.94

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G322593  

Wheat: No orthologous gene

GO biological process


proteolysis


GO cellular component


chloroplast membrane, integral component of membrane, plasma membrane


GO molecular function


serine-type endopeptidase activity


Protein domain


PfamPF01694, Rhomboid family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.645.57E-09
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.136.75E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.201.89E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.174.56E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.681.18E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.702.36E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.546.08E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.864.03E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.803.04E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.571.08E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.628.06E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.944.99E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.801.14E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.059.28E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.182.19E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.936.86E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.051.14E-16
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.529.23E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.652.61E-12
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.702.30E-12
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.822.69E-13
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.672.54E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.514.33E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.